Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN4P51793 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN4P51793 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLCN4P51793 KLF2P4-201ENST00000451959 1225 ntBASIC16.79■□□□□ 0.28
CLCN4P51793 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN4P51793 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN4P51793 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN4P51793 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN4P51793 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
CLCN4P51793 AL022328.1-201ENST00000610050 478 ntBASIC16.79■□□□□ 0.28
CLCN4P51793 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN4P51793 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN4P51793 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN4P51793 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN4P51793 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLCN4P51793 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN4P51793 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN4P51793 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 UBALD1-205ENST00000590891 2641 ntBASIC16.79■□□□□ 0.28
CLCN4P51793 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CLCN4P51793 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLCN4P51793 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.78■□□□□ 0.28
CLCN4P51793 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CLCN4P51793 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CLCN4P51793 TOMM22P5-201ENST00000416399 439 ntBASIC16.78■□□□□ 0.28
CLCN4P51793 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCN4P51793 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLCN4P51793 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLCN4P51793 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCN4P51793 AL583810.1-201ENST00000553344 1045 ntBASIC16.78■□□□□ 0.28
CLCN4P51793 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CLCN4P51793 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 AC084018.2-201ENST00000613093 2607 ntBASIC16.78■□□□□ 0.28
CLCN4P51793 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN4P51793 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLCN4P51793 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN4P51793 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN4P51793 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN4P51793 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCN4P51793 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN4P51793 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN4P51793 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CLCN4P51793 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN4P51793 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.77■□□□□ 0.28
CLCN4P51793 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN4P51793 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN4P51793 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CLCN4P51793 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN4P51793 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN4P51793 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN4P51793 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN4P51793 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CLCN4P51793 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCN4P51793 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCN4P51793 ENPP7P5-201ENST00000541031 1031 ntBASIC16.77■□□□□ 0.28
CLCN4P51793 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCN4P51793 MIR4538-201ENST00000581377 78 ntBASIC16.77■□□□□ 0.28
CLCN4P51793 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN4P51793 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN4P51793 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CLCN4P51793 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN4P51793 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN4P51793 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN4P51793 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN4P51793 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN4P51793 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN4P51793 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN4P51793 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN4P51793 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN4P51793 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN4P51793 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN4P51793 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CLCN4P51793 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.77■□□□□ 0.27
CLCN4P51793 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN4P51793 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN4P51793 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms