Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.19■□□□□ 0.34
SSR1P43307 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.19■□□□□ 0.34
SSR1P43307 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.19■□□□□ 0.34
SSR1P43307 AL590627.1-203ENST00000421194 1026 ntBASIC17.19■□□□□ 0.34
SSR1P43307 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.19■□□□□ 0.34
SSR1P43307 KRT18P34-201ENST00000488218 1270 ntBASIC17.19■□□□□ 0.34
SSR1P43307 AC034105.1-201ENST00000563488 319 ntBASIC17.19■□□□□ 0.34
SSR1P43307 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.19■□□□□ 0.34
SSR1P43307 MIR3909-201ENST00000579518 119 ntBASIC17.19■□□□□ 0.34
SSR1P43307 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.19■□□□□ 0.34
SSR1P43307 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.19■□□□□ 0.34
SSR1P43307 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SSR1P43307 AL592424.1-201ENST00000563624 1536 ntBASIC17.19■□□□□ 0.34
SSR1P43307 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SSR1P43307 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SSR1P43307 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.19■□□□□ 0.34
SSR1P43307 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.19■□□□□ 0.34
SSR1P43307 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
SSR1P43307 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SSR1P43307 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SSR1P43307 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.19■□□□□ 0.34
SSR1P43307 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SSR1P43307 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SSR1P43307 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.18■□□□□ 0.34
SSR1P43307 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 OR2I1P-209ENST00000641730 5365 ntBASIC17.18■□□□□ 0.34
SSR1P43307 AC099063.4-201ENST00000641099 1602 ntBASIC17.18■□□□□ 0.34
SSR1P43307 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.18■□□□□ 0.34
SSR1P43307 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
SSR1P43307 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SSR1P43307 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.18■□□□□ 0.34
SSR1P43307 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC17.18■□□□□ 0.34
SSR1P43307 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.18■□□□□ 0.34
SSR1P43307 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.18■□□□□ 0.34
SSR1P43307 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.18■□□□□ 0.34
SSR1P43307 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.18■□□□□ 0.34
SSR1P43307 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.18■□□□□ 0.34
SSR1P43307 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.18■□□□□ 0.34
SSR1P43307 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.18■□□□□ 0.34
SSR1P43307 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SSR1P43307 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SSR1P43307 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.18■□□□□ 0.34
SSR1P43307 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.18■□□□□ 0.34
SSR1P43307 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SSR1P43307 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSR1P43307 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.18■□□□□ 0.34
SSR1P43307 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SSR1P43307 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.17■□□□□ 0.34
SSR1P43307 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SSR1P43307 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 AC016027.1-202ENST00000607927 1699 ntBASIC17.17■□□□□ 0.34
SSR1P43307 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SSR1P43307 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SSR1P43307 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.17■□□□□ 0.34
SSR1P43307 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.17■□□□□ 0.34
SSR1P43307 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.17■□□□□ 0.34
SSR1P43307 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SSR1P43307 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SSR1P43307 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.17■□□□□ 0.34
SSR1P43307 KRT18P2-201ENST00000447938 1258 ntBASIC17.17■□□□□ 0.34
SSR1P43307 KRT19P2-202ENST00000557173 1012 ntBASIC17.17■□□□□ 0.34
SSR1P43307 AC145285.3-201ENST00000564603 959 ntBASIC17.17■□□□□ 0.34
SSR1P43307 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.17■□□□□ 0.34
SSR1P43307 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms