Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTTP42858 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HTTP42858 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.65■□□□□ 0.42
HTTP42858 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.65■□□□□ 0.42
HTTP42858 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.65■□□□□ 0.42
HTTP42858 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.65■□□□□ 0.42
HTTP42858 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.65■□□□□ 0.42
HTTP42858 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.65■□□□□ 0.42
HTTP42858 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HTTP42858 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTTP42858 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HTTP42858 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTTP42858 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTTP42858 KRT8P35-201ENST00000483942 1338 ntBASIC17.65■□□□□ 0.42
HTTP42858 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTTP42858 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTTP42858 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTTP42858 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTTP42858 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.65■□□□□ 0.42
HTTP42858 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HTTP42858 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.65■□□□□ 0.42
HTTP42858 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.65■□□□□ 0.42
HTTP42858 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HTTP42858 PRSS30P-206ENST00000641773 873 ntBASIC17.65■□□□□ 0.42
HTTP42858 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTTP42858 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HTTP42858 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
HTTP42858 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
HTTP42858 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HTTP42858 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HTTP42858 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTTP42858 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTTP42858 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HTTP42858 AC025181.2-201ENST00000606994 802 ntBASIC17.64■□□□□ 0.41
HTTP42858 CASP16P-204ENST00000635032 809 ntBASIC17.64■□□□□ 0.41
HTTP42858 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTTP42858 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HTTP42858 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HTTP42858 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HTTP42858 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.64■□□□□ 0.41
HTTP42858 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.64■□□□□ 0.41
HTTP42858 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTTP42858 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.64■□□□□ 0.41
HTTP42858 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTTP42858 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HTTP42858 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HTTP42858 AC007274.2-201ENST00000421675 662 ntBASIC17.64■□□□□ 0.41
HTTP42858 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
HTTP42858 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTTP42858 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.64■□□□□ 0.41
HTTP42858 AL353726.2-201ENST00000623259 884 ntBASIC17.64■□□□□ 0.41
HTTP42858 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HTTP42858 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTTP42858 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.64■□□□□ 0.41
HTTP42858 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HTTP42858 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTTP42858 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.64■□□□□ 0.41
HTTP42858 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTTP42858 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.63■□□□□ 0.41
HTTP42858 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.63■□□□□ 0.41
HTTP42858 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 RN7SL713P-201ENST00000582127 302 ntBASIC17.63■□□□□ 0.41
HTTP42858 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.63■□□□□ 0.41
HTTP42858 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.63■□□□□ 0.41
HTTP42858 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
HTTP42858 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.63■□□□□ 0.41
HTTP42858 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.63■□□□□ 0.41
HTTP42858 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.63■□□□□ 0.41
HTTP42858 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.63■□□□□ 0.41
HTTP42858 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HTTP42858 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 AL354877.1-201ENST00000424412 413 ntBASIC17.63■□□□□ 0.41
HTTP42858 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.63■□□□□ 0.41
HTTP42858 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.63■□□□□ 0.41
HTTP42858 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.63■□□□□ 0.41
HTTP42858 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 AP005019.2-201ENST00000615104 511 ntBASIC17.63■□□□□ 0.41
HTTP42858 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTTP42858 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HTTP42858 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HTTP42858 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HTTP42858 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HTTP42858 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.62■□□□□ 0.41
HTTP42858 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HTTP42858 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms