Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFSF9P41273 AC104794.3-201ENST00000566840 1248 ntBASIC17.31■□□□□ 0.36
TNFSF9P41273 AL450472.2-201ENST00000603663 1156 ntBASIC17.31■□□□□ 0.36
TNFSF9P41273 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.31■□□□□ 0.36
TNFSF9P41273 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.31■□□□□ 0.36
TNFSF9P41273 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.31■□□□□ 0.36
TNFSF9P41273 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.31■□□□□ 0.36
TNFSF9P41273 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.31■□□□□ 0.36
TNFSF9P41273 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFSF9P41273 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF9P41273 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF9P41273 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFSF9P41273 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFSF9P41273 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.31■□□□□ 0.36
TNFSF9P41273 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF9P41273 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF9P41273 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF9P41273 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF9P41273 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF9P41273 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF9P41273 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFSF9P41273 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFSF9P41273 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF9P41273 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF9P41273 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TNFSF9P41273 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF9P41273 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.3■□□□□ 0.36
TNFSF9P41273 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TNFSF9P41273 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TNFSF9P41273 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
TNFSF9P41273 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFSF9P41273 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF9P41273 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF9P41273 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
TNFSF9P41273 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.3■□□□□ 0.36
TNFSF9P41273 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFSF9P41273 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFSF9P41273 AC114501.2-201ENST00000439631 535 ntBASIC17.3■□□□□ 0.36
TNFSF9P41273 TARDBPP1-201ENST00000442013 1203 ntBASIC17.3■□□□□ 0.36
TNFSF9P41273 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.3■□□□□ 0.36
TNFSF9P41273 AL589987.1-201ENST00000453380 819 ntBASIC17.3■□□□□ 0.36
TNFSF9P41273 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFSF9P41273 SDHAP3-202ENST00000515467 728 ntBASIC17.3■□□□□ 0.36
TNFSF9P41273 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.3■□□□□ 0.36
TNFSF9P41273 AC138761.1-201ENST00000584393 385 ntBASIC17.3■□□□□ 0.36
TNFSF9P41273 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFSF9P41273 LINC01115-203ENST00000606068 577 ntBASIC17.3■□□□□ 0.36
TNFSF9P41273 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.3■□□□□ 0.36
TNFSF9P41273 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF9P41273 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFSF9P41273 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.3■□□□□ 0.36
TNFSF9P41273 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TNFSF9P41273 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFSF9P41273 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFSF9P41273 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TNFSF9P41273 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TNFSF9P41273 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFSF9P41273 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFSF9P41273 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
TNFSF9P41273 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TNFSF9P41273 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFSF9P41273 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFSF9P41273 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TNFSF9P41273 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 FAM207CP-201ENST00000443486 507 ntBASIC17.29■□□□□ 0.36
TNFSF9P41273 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFSF9P41273 GNAQP1-201ENST00000444815 1067 ntBASIC17.29■□□□□ 0.36
TNFSF9P41273 SPTLC1P1-201ENST00000447199 261 ntBASIC17.29■□□□□ 0.36
TNFSF9P41273 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.29■□□□□ 0.36
TNFSF9P41273 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TNFSF9P41273 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.29■□□□□ 0.36
TNFSF9P41273 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.29■□□□□ 0.36
TNFSF9P41273 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.29■□□□□ 0.36
TNFSF9P41273 AC097359.3-201ENST00000603982 1210 ntBASIC17.29■□□□□ 0.36
TNFSF9P41273 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TNFSF9P41273 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 BTBD7P1-201ENST00000447253 1453 ntBASIC17.29■□□□□ 0.36
TNFSF9P41273 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFSF9P41273 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TNFSF9P41273 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFSF9P41273 Z97205.2-201ENST00000564697 1639 ntBASIC17.29■□□□□ 0.36
TNFSF9P41273 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms