Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC23.56■■□□□ 1.36
KDM5CP41229 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC23.56■■□□□ 1.36
KDM5CP41229 PTPA-217ENST00000434095 870 ntTSL 2 BASIC23.56■■□□□ 1.36
KDM5CP41229 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC23.56■■□□□ 1.36
KDM5CP41229 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC23.56■■□□□ 1.36
KDM5CP41229 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KDM5CP41229 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KDM5CP41229 AC128714.1-201ENST00000637035 887 ntBASIC23.56■■□□□ 1.36
KDM5CP41229 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KDM5CP41229 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KDM5CP41229 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KDM5CP41229 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KDM5CP41229 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
KDM5CP41229 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KDM5CP41229 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC23.55■■□□□ 1.36
KDM5CP41229 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
KDM5CP41229 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC23.55■■□□□ 1.36
KDM5CP41229 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
KDM5CP41229 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
KDM5CP41229 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
KDM5CP41229 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
KDM5CP41229 AC104457.1-201ENST00000401024 814 ntBASIC23.55■■□□□ 1.36
KDM5CP41229 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC23.55■■□□□ 1.36
KDM5CP41229 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC23.55■■□□□ 1.36
KDM5CP41229 SPCS2P2-201ENST00000603270 608 ntBASIC23.55■■□□□ 1.36
KDM5CP41229 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC23.55■■□□□ 1.36
KDM5CP41229 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC23.55■■□□□ 1.36
KDM5CP41229 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC23.55■■□□□ 1.36
KDM5CP41229 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM5CP41229 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
KDM5CP41229 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC23.55■■□□□ 1.36
KDM5CP41229 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
KDM5CP41229 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC23.54■■□□□ 1.36
KDM5CP41229 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC23.54■■□□□ 1.36
KDM5CP41229 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
KDM5CP41229 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC23.54■■□□□ 1.36
KDM5CP41229 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
KDM5CP41229 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 AC079178.1-201ENST00000420915 656 ntBASIC23.54■■□□□ 1.36
KDM5CP41229 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC23.54■■□□□ 1.36
KDM5CP41229 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC23.54■■□□□ 1.36
KDM5CP41229 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC23.54■■□□□ 1.36
KDM5CP41229 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC23.54■■□□□ 1.36
KDM5CP41229 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC23.54■■□□□ 1.36
KDM5CP41229 KLK11-210ENST00000600362 759 ntTSL 3 BASIC23.54■■□□□ 1.36
KDM5CP41229 AC132938.4-201ENST00000623835 848 ntBASIC23.54■■□□□ 1.36
KDM5CP41229 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
KDM5CP41229 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
KDM5CP41229 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
KDM5CP41229 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
KDM5CP41229 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KDM5CP41229 FNTAP2-201ENST00000430308 634 ntBASIC23.53■■□□□ 1.36
KDM5CP41229 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC23.53■■□□□ 1.36
KDM5CP41229 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC23.53■■□□□ 1.36
KDM5CP41229 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
KDM5CP41229 TK1-203ENST00000588734 1681 ntTSL 2 BASIC23.53■■□□□ 1.36
KDM5CP41229 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC23.53■■□□□ 1.36
KDM5CP41229 AC138649.2-201ENST00000615886 705 ntBASIC23.53■■□□□ 1.36
KDM5CP41229 AP001505.2-201ENST00000616815 443 ntBASIC23.53■■□□□ 1.36
KDM5CP41229 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
KDM5CP41229 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
KDM5CP41229 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC23.53■■□□□ 1.36
KDM5CP41229 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KDM5CP41229 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
KDM5CP41229 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KDM5CP41229 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC23.53■■□□□ 1.36
KDM5CP41229 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
KDM5CP41229 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC23.53■■□□□ 1.36
KDM5CP41229 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC23.53■■□□□ 1.36
KDM5CP41229 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms