Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.65■□□□□ 0.74
TM4SF1P30408 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.65■□□□□ 0.74
TM4SF1P30408 AC015967.2-201ENST00000624092 234 ntBASIC19.65■□□□□ 0.74
TM4SF1P30408 AC006435.4-201ENST00000625037 234 ntBASIC19.65■□□□□ 0.74
TM4SF1P30408 AL356737.1-201ENST00000634391 234 ntBASIC19.65■□□□□ 0.74
TM4SF1P30408 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF1P30408 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.65■□□□□ 0.74
TM4SF1P30408 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF1P30408 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.65■□□□□ 0.74
TM4SF1P30408 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.65■□□□□ 0.74
TM4SF1P30408 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF1P30408 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF1P30408 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF1P30408 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.64■□□□□ 0.74
TM4SF1P30408 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
TM4SF1P30408 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF1P30408 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.64■□□□□ 0.73
TM4SF1P30408 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TM4SF1P30408 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF1P30408 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF1P30408 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF1P30408 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
TM4SF1P30408 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF1P30408 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF1P30408 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.64■□□□□ 0.73
TM4SF1P30408 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.64■□□□□ 0.73
TM4SF1P30408 MTX1P1-201ENST00000440904 838 ntBASIC19.64■□□□□ 0.73
TM4SF1P30408 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
TM4SF1P30408 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF1P30408 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
TM4SF1P30408 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.64■□□□□ 0.73
TM4SF1P30408 AL096828.3-201ENST00000615354 462 ntBASIC19.64■□□□□ 0.73
TM4SF1P30408 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TM4SF1P30408 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF1P30408 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF1P30408 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF1P30408 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.64■□□□□ 0.73
TM4SF1P30408 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF1P30408 ALOX12P2-203ENST00000570921 1945 ntBASIC19.64■□□□□ 0.73
TM4SF1P30408 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TM4SF1P30408 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TM4SF1P30408 AC092171.3-201ENST00000610122 2651 ntBASIC19.64■□□□□ 0.73
TM4SF1P30408 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF1P30408 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TM4SF1P30408 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.63■□□□□ 0.73
TM4SF1P30408 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TM4SF1P30408 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.63■□□□□ 0.73
TM4SF1P30408 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.63■□□□□ 0.73
TM4SF1P30408 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 AL133267.1-201ENST00000398220 340 ntBASIC19.63■□□□□ 0.73
TM4SF1P30408 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.63■□□□□ 0.73
TM4SF1P30408 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.63■□□□□ 0.73
TM4SF1P30408 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.63■□□□□ 0.73
TM4SF1P30408 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.63■□□□□ 0.73
TM4SF1P30408 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.63■□□□□ 0.73
TM4SF1P30408 AL590640.2-201ENST00000457038 527 ntBASIC19.63■□□□□ 0.73
TM4SF1P30408 KRT18P25-201ENST00000508931 1278 ntBASIC19.63■□□□□ 0.73
TM4SF1P30408 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.63■□□□□ 0.73
TM4SF1P30408 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 EEF1DP1-201ENST00000585891 896 ntBASIC19.63■□□□□ 0.73
TM4SF1P30408 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TM4SF1P30408 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.63■□□□□ 0.73
TM4SF1P30408 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.63■□□□□ 0.73
TM4SF1P30408 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TM4SF1P30408 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.63■□□□□ 0.73
TM4SF1P30408 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.63■□□□□ 0.73
TM4SF1P30408 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
TM4SF1P30408 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.63■□□□□ 0.73
TM4SF1P30408 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.63■□□□□ 0.73
TM4SF1P30408 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF1P30408 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TM4SF1P30408 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TM4SF1P30408 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF1P30408 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF1P30408 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF1P30408 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
TM4SF1P30408 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF1P30408 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF1P30408 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF1P30408 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TM4SF1P30408 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TM4SF1P30408 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF1P30408 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.62■□□□□ 0.73
TM4SF1P30408 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.62■□□□□ 0.73
TM4SF1P30408 EIF4HP1-201ENST00000453115 687 ntBASIC19.62■□□□□ 0.73
TM4SF1P30408 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.62■□□□□ 0.73
TM4SF1P30408 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.62■□□□□ 0.73
TM4SF1P30408 MIR3619-201ENST00000579667 83 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms