Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.06■□□□□ 0.16
CNTFP26441 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.06■□□□□ 0.16
CNTFP26441 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
CNTFP26441 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.06■□□□□ 0.16
CNTFP26441 TPM4P1-201ENST00000436100 807 ntBASIC16.06■□□□□ 0.16
CNTFP26441 AC098831.1-202ENST00000438821 336 ntBASIC16.06■□□□□ 0.16
CNTFP26441 AC009947.1-201ENST00000444350 727 ntBASIC16.06■□□□□ 0.16
CNTFP26441 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.06■□□□□ 0.16
CNTFP26441 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.06■□□□□ 0.16
CNTFP26441 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.06■□□□□ 0.16
CNTFP26441 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.06■□□□□ 0.16
CNTFP26441 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.06■□□□□ 0.16
CNTFP26441 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.06■□□□□ 0.16
CNTFP26441 AC243562.2-201ENST00000561247 970 ntBASIC16.06■□□□□ 0.16
CNTFP26441 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.06■□□□□ 0.16
CNTFP26441 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 AL773604.1-201ENST00000617417 272 ntBASIC16.06■□□□□ 0.16
CNTFP26441 AL031008.1-201ENST00000619963 541 ntBASIC16.06■□□□□ 0.16
CNTFP26441 AL161645.1-201ENST00000622716 1255 ntBASIC16.06■□□□□ 0.16
CNTFP26441 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.06■□□□□ 0.16
CNTFP26441 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CNTFP26441 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CNTFP26441 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CNTFP26441 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.06■□□□□ 0.16
CNTFP26441 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNTFP26441 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CNTFP26441 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.05■□□□□ 0.16
CNTFP26441 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.05■□□□□ 0.16
CNTFP26441 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.05■□□□□ 0.16
CNTFP26441 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.05■□□□□ 0.16
CNTFP26441 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.05■□□□□ 0.16
CNTFP26441 FAAHP1-202ENST00000446499 1238 ntBASIC16.05■□□□□ 0.16
CNTFP26441 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CNTFP26441 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.05■□□□□ 0.16
CNTFP26441 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.05■□□□□ 0.16
CNTFP26441 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.05■□□□□ 0.16
CNTFP26441 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.05■□□□□ 0.16
CNTFP26441 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.05■□□□□ 0.16
CNTFP26441 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.05■□□□□ 0.16
CNTFP26441 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.05■□□□□ 0.16
CNTFP26441 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
CNTFP26441 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CNTFP26441 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNTFP26441 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.04■□□□□ 0.16
CNTFP26441 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTFP26441 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.04■□□□□ 0.16
CNTFP26441 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTFP26441 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.04■□□□□ 0.16
CNTFP26441 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CNTFP26441 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTFP26441 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTFP26441 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CNTFP26441 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTFP26441 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CNTFP26441 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTFP26441 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNTFP26441 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNTFP26441 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms