Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.7■□□□□ 0.26
H2AFXP16104 AC073592.4-201ENST00000623827 446 ntBASIC16.7■□□□□ 0.26
H2AFXP16104 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2AFXP16104 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
H2AFXP16104 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
H2AFXP16104 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H2AFXP16104 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.7■□□□□ 0.26
H2AFXP16104 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.7■□□□□ 0.26
H2AFXP16104 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.7■□□□□ 0.26
H2AFXP16104 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2AFXP16104 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
H2AFXP16104 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
H2AFXP16104 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2AFXP16104 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2AFXP16104 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2AFXP16104 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
H2AFXP16104 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2AFXP16104 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2AFXP16104 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2AFXP16104 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
H2AFXP16104 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
H2AFXP16104 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.69■□□□□ 0.26
H2AFXP16104 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.69■□□□□ 0.26
H2AFXP16104 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.69■□□□□ 0.26
H2AFXP16104 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.69■□□□□ 0.26
H2AFXP16104 AC087163.2-201ENST00000457299 853 ntBASIC16.69■□□□□ 0.26
H2AFXP16104 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.69■□□□□ 0.26
H2AFXP16104 AC087641.1-201ENST00000557561 1021 ntBASIC16.69■□□□□ 0.26
H2AFXP16104 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 MIR4651-201ENST00000582622 73 ntBASIC16.69■□□□□ 0.26
H2AFXP16104 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.69■□□□□ 0.26
H2AFXP16104 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
H2AFXP16104 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
H2AFXP16104 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
H2AFXP16104 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.69■□□□□ 0.26
H2AFXP16104 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.69■□□□□ 0.26
H2AFXP16104 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
H2AFXP16104 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 AC063926.3-201ENST00000624734 5658 ntBASIC16.69■□□□□ 0.26
H2AFXP16104 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.69■□□□□ 0.26
H2AFXP16104 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
H2AFXP16104 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2AFXP16104 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
H2AFXP16104 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.68■□□□□ 0.26
H2AFXP16104 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
H2AFXP16104 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
H2AFXP16104 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.68■□□□□ 0.26
H2AFXP16104 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.68■□□□□ 0.26
H2AFXP16104 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.68■□□□□ 0.26
H2AFXP16104 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.68■□□□□ 0.26
H2AFXP16104 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.68■□□□□ 0.26
H2AFXP16104 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.68■□□□□ 0.26
H2AFXP16104 AL355075.4-201ENST00000554988 638 ntBASIC16.68■□□□□ 0.26
H2AFXP16104 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.68■□□□□ 0.26
H2AFXP16104 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.68■□□□□ 0.26
H2AFXP16104 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.68■□□□□ 0.26
H2AFXP16104 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
H2AFXP16104 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.68■□□□□ 0.26
H2AFXP16104 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.68■□□□□ 0.26
H2AFXP16104 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
H2AFXP16104 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC16.68■□□□□ 0.26
H2AFXP16104 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2AFXP16104 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2AFXP16104 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.67■□□□□ 0.26
H2AFXP16104 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2AFXP16104 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2AFXP16104 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms