Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.92■□□□□ 0.46
COL11A1P12107 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL11A1P12107 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.92■□□□□ 0.46
COL11A1P12107 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COL11A1P12107 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COL11A1P12107 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL11A1P12107 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL11A1P12107 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL11A1P12107 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL11A1P12107 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.91■□□□□ 0.46
COL11A1P12107 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
COL11A1P12107 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.91■□□□□ 0.46
COL11A1P12107 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.91■□□□□ 0.46
COL11A1P12107 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.91■□□□□ 0.46
COL11A1P12107 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.91■□□□□ 0.46
COL11A1P12107 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.91■□□□□ 0.46
COL11A1P12107 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 PCDHA14-201ENST00000506751 2298 ntBASIC17.91■□□□□ 0.46
COL11A1P12107 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.91■□□□□ 0.46
COL11A1P12107 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.91■□□□□ 0.46
COL11A1P12107 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL11A1P12107 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.91■□□□□ 0.46
COL11A1P12107 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
COL11A1P12107 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL11A1P12107 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.91■□□□□ 0.46
COL11A1P12107 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.91■□□□□ 0.46
COL11A1P12107 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.91■□□□□ 0.46
COL11A1P12107 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.91■□□□□ 0.46
COL11A1P12107 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
COL11A1P12107 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL11A1P12107 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
COL11A1P12107 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.91■□□□□ 0.46
COL11A1P12107 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL11A1P12107 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL11A1P12107 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL11A1P12107 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL11A1P12107 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL11A1P12107 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL11A1P12107 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.9■□□□□ 0.46
COL11A1P12107 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.9■□□□□ 0.46
COL11A1P12107 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COL11A1P12107 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL11A1P12107 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
COL11A1P12107 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.9■□□□□ 0.46
COL11A1P12107 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
COL11A1P12107 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
COL11A1P12107 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.9■□□□□ 0.46
COL11A1P12107 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
COL11A1P12107 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL11A1P12107 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.9■□□□□ 0.46
COL11A1P12107 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.9■□□□□ 0.46
COL11A1P12107 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.9■□□□□ 0.46
COL11A1P12107 CNN2P10-201ENST00000443067 918 ntBASIC17.9■□□□□ 0.46
COL11A1P12107 FAM8A2P-201ENST00000528813 1142 ntBASIC17.9■□□□□ 0.46
COL11A1P12107 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.9■□□□□ 0.46
COL11A1P12107 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.9■□□□□ 0.46
COL11A1P12107 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.9■□□□□ 0.46
COL11A1P12107 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.9■□□□□ 0.46
COL11A1P12107 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.9■□□□□ 0.46
COL11A1P12107 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL11A1P12107 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL11A1P12107 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.9■□□□□ 0.46
COL11A1P12107 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL11A1P12107 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL11A1P12107 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.9■□□□□ 0.46
COL11A1P12107 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
COL11A1P12107 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
COL11A1P12107 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
COL11A1P12107 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
COL11A1P12107 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
COL11A1P12107 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL11A1P12107 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COL11A1P12107 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.89■□□□□ 0.45
COL11A1P12107 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL11A1P12107 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL11A1P12107 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.89■□□□□ 0.45
COL11A1P12107 MIR1202-201ENST00000408529 83 ntBASIC17.89■□□□□ 0.45
COL11A1P12107 AC243960.2-201ENST00000600996 747 ntBASIC17.89■□□□□ 0.45
COL11A1P12107 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.89■□□□□ 0.45
COL11A1P12107 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL11A1P12107 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL11A1P12107 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL11A1P12107 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL11A1P12107 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.89■□□□□ 0.45
COL11A1P12107 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL11A1P12107 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL11A1P12107 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL11A1P12107 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms