Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC172P0C7W6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.46■□□□□ 0.38
CCDC172P0C7W6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.46■□□□□ 0.38
CCDC172P0C7W6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC172P0C7W6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC172P0C7W6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC172P0C7W6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 AC034105.1-201ENST00000563488 319 ntBASIC17.45■□□□□ 0.38
CCDC172P0C7W6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 MIR4321-201ENST00000592276 80 ntBASIC17.45■□□□□ 0.38
CCDC172P0C7W6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC172P0C7W6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 AC009078.2-202ENST00000463353 338 ntBASIC17.44■□□□□ 0.38
CCDC172P0C7W6 AC074386.1-202ENST00000463561 864 ntBASIC17.44■□□□□ 0.38
CCDC172P0C7W6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 PRYP6-201ENST00000514804 343 ntBASIC17.44■□□□□ 0.38
CCDC172P0C7W6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 AC002347.1-201ENST00000569543 541 ntBASIC17.44■□□□□ 0.38
CCDC172P0C7W6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 AC068137.2-201ENST00000605408 478 ntBASIC17.44■□□□□ 0.38
CCDC172P0C7W6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.44■□□□□ 0.38
CCDC172P0C7W6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC172P0C7W6 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 ZNF259P1-201ENST00000407656 1365 ntBASIC17.43■□□□□ 0.38
CCDC172P0C7W6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 AC011477.6-201ENST00000604980 1927 ntBASIC17.43■□□□□ 0.38
CCDC172P0C7W6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 RPL13AP23-201ENST00000480739 586 ntBASIC17.43■□□□□ 0.38
CCDC172P0C7W6 AC112191.1-201ENST00000523689 701 ntBASIC17.43■□□□□ 0.38
CCDC172P0C7W6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms