Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
FREM3P0C091 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.56□□□□□ -0.08
FREM3P0C091 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
FREM3P0C091 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
FREM3P0C091 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.56□□□□□ -0.08
FREM3P0C091 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.56□□□□□ -0.08
FREM3P0C091 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.56□□□□□ -0.08
FREM3P0C091 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.56□□□□□ -0.08
FREM3P0C091 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.56□□□□□ -0.08
FREM3P0C091 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
FREM3P0C091 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.56□□□□□ -0.08
FREM3P0C091 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.56□□□□□ -0.08
FREM3P0C091 AL033527.5-202ENST00000641632 1098 ntBASIC14.56□□□□□ -0.08
FREM3P0C091 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.56□□□□□ -0.08
FREM3P0C091 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.56□□□□□ -0.08
FREM3P0C091 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.56□□□□□ -0.08
FREM3P0C091 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
FREM3P0C091 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.56□□□□□ -0.08
FREM3P0C091 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
FREM3P0C091 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
FREM3P0C091 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
FREM3P0C091 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 AL139010.1-201ENST00000454878 894 ntBASIC14.56□□□□□ -0.08
FREM3P0C091 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.56□□□□□ -0.08
FREM3P0C091 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.56□□□□□ -0.08
FREM3P0C091 WASH4P-201ENST00000564273 1246 ntBASIC14.56□□□□□ -0.08
FREM3P0C091 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.56□□□□□ -0.08
FREM3P0C091 LINC01115-203ENST00000606068 577 ntBASIC14.56□□□□□ -0.08
FREM3P0C091 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.56□□□□□ -0.08
FREM3P0C091 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.56□□□□□ -0.08
FREM3P0C091 AL109936.8-201ENST00000641772 604 ntBASIC14.56□□□□□ -0.08
FREM3P0C091 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
FREM3P0C091 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.56□□□□□ -0.08
FREM3P0C091 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FREM3P0C091 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
FREM3P0C091 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
FREM3P0C091 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
FREM3P0C091 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
FREM3P0C091 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
FREM3P0C091 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
FREM3P0C091 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.55□□□□□ -0.08
FREM3P0C091 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.55□□□□□ -0.08
FREM3P0C091 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.55□□□□□ -0.08
FREM3P0C091 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
FREM3P0C091 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.55□□□□□ -0.08
FREM3P0C091 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 AC022188.1-201ENST00000620960 1664 ntBASIC14.55□□□□□ -0.08
FREM3P0C091 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 LINC01144-201ENST00000626198 1710 ntBASIC14.55□□□□□ -0.08
FREM3P0C091 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
FREM3P0C091 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.55□□□□□ -0.08
FREM3P0C091 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
FREM3P0C091 ZNF890P-202ENST00000530367 1156 ntBASIC14.55□□□□□ -0.08
FREM3P0C091 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.55□□□□□ -0.08
FREM3P0C091 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.55□□□□□ -0.08
FREM3P0C091 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.55□□□□□ -0.08
FREM3P0C091 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.55□□□□□ -0.08
FREM3P0C091 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.55□□□□□ -0.08
FREM3P0C091 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.55□□□□□ -0.08
FREM3P0C091 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM3P0C091 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
FREM3P0C091 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.54□□□□□ -0.08
FREM3P0C091 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms