Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.28□□□□□ -0.44
TCRAP04437 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.28□□□□□ -0.44
TCRAP04437 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.28□□□□□ -0.44
TCRAP04437 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.28□□□□□ -0.44
TCRAP04437 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 AL732292.2-201ENST00000609649 430 ntBASIC12.28□□□□□ -0.44
TCRAP04437 AC092119.3-201ENST00000612618 583 ntBASIC12.28□□□□□ -0.44
TCRAP04437 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.28□□□□□ -0.44
TCRAP04437 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.28□□□□□ -0.44
TCRAP04437 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.28□□□□□ -0.44
TCRAP04437 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
TCRAP04437 AC007292.2-201ENST00000593524 1812 ntBASIC12.27□□□□□ -0.44
TCRAP04437 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TCRAP04437 AC106881.1-201ENST00000605849 3329 ntBASIC12.27□□□□□ -0.44
TCRAP04437 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TCRAP04437 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TCRAP04437 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.27□□□□□ -0.44
TCRAP04437 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
TCRAP04437 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TCRAP04437 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
TCRAP04437 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.27□□□□□ -0.44
TCRAP04437 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
TCRAP04437 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
TCRAP04437 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
TCRAP04437 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.27□□□□□ -0.44
TCRAP04437 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRAP04437 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRAP04437 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TCRAP04437 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TCRAP04437 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TCRAP04437 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TCRAP04437 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.27□□□□□ -0.45
TCRAP04437 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TCRAP04437 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRAP04437 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
TCRAP04437 LAGE3P1-201ENST00000425356 484 ntBASIC12.27□□□□□ -0.45
TCRAP04437 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.27□□□□□ -0.45
TCRAP04437 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TCRAP04437 SCARNA2-201ENST00000458748 420 ntBASIC12.27□□□□□ -0.45
TCRAP04437 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.27□□□□□ -0.45
TCRAP04437 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.27□□□□□ -0.45
TCRAP04437 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.27□□□□□ -0.45
TCRAP04437 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.27□□□□□ -0.45
TCRAP04437 AC091076.1-201ENST00000610741 619 ntBASIC12.27□□□□□ -0.45
TCRAP04437 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.27□□□□□ -0.45
TCRAP04437 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRAP04437 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.27□□□□□ -0.45
TCRAP04437 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TCRAP04437 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TCRAP04437 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRAP04437 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.27□□□□□ -0.45
TCRAP04437 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.27□□□□□ -0.45
TCRAP04437 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TCRAP04437 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRAP04437 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TCRAP04437 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRAP04437 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TCRAP04437 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.27□□□□□ -0.45
TCRAP04437 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRAP04437 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TCRAP04437 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.27□□□□□ -0.45
TCRAP04437 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.26□□□□□ -0.45
TCRAP04437 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.26□□□□□ -0.45
TCRAP04437 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TCRAP04437 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
TCRAP04437 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms