Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.11■□□□□ 0.33
TIMP1P01033 NDUFV2P1-201ENST00000596415 907 ntBASIC17.11■□□□□ 0.33
TIMP1P01033 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 AC134407.2-201ENST00000625089 1978 ntBASIC17.11■□□□□ 0.33
TIMP1P01033 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMP1P01033 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TIMP1P01033 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.1■□□□□ 0.33
TIMP1P01033 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.1■□□□□ 0.33
TIMP1P01033 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.1■□□□□ 0.33
TIMP1P01033 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.1■□□□□ 0.33
TIMP1P01033 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.1■□□□□ 0.33
TIMP1P01033 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TIMP1P01033 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMP1P01033 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMP1P01033 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.1■□□□□ 0.33
TIMP1P01033 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.1■□□□□ 0.33
TIMP1P01033 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.1■□□□□ 0.33
TIMP1P01033 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.1■□□□□ 0.33
TIMP1P01033 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.1■□□□□ 0.33
TIMP1P01033 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.1■□□□□ 0.33
TIMP1P01033 GAPDHP40-201ENST00000505218 1006 ntBASIC17.1■□□□□ 0.33
TIMP1P01033 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.1■□□□□ 0.33
TIMP1P01033 AC126915.1-201ENST00000522847 1038 ntBASIC17.1■□□□□ 0.33
TIMP1P01033 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TIMP1P01033 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TIMP1P01033 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
TIMP1P01033 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.1■□□□□ 0.33
TIMP1P01033 AL451050.2-201ENST00000606967 682 ntBASIC17.1■□□□□ 0.33
TIMP1P01033 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMP1P01033 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TIMP1P01033 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TIMP1P01033 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TIMP1P01033 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.1■□□□□ 0.33
TIMP1P01033 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMP1P01033 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.1■□□□□ 0.33
TIMP1P01033 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMP1P01033 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TIMP1P01033 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.1■□□□□ 0.33
TIMP1P01033 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.1■□□□□ 0.33
TIMP1P01033 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TIMP1P01033 HLA-A-202ENST00000376806 1854 ntBASIC17.1■□□□□ 0.33
TIMP1P01033 NOC2LP2-201ENST00000407594 1944 ntBASIC17.09■□□□□ 0.33
TIMP1P01033 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMP1P01033 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMP1P01033 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMP1P01033 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TIMP1P01033 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMP1P01033 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMP1P01033 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMP1P01033 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.09■□□□□ 0.33
TIMP1P01033 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TIMP1P01033 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMP1P01033 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMP1P01033 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
TIMP1P01033 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMP1P01033 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.09■□□□□ 0.33
TIMP1P01033 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TIMP1P01033 AL133267.1-201ENST00000398220 340 ntBASIC17.09■□□□□ 0.33
TIMP1P01033 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
TIMP1P01033 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMP1P01033 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.09■□□□□ 0.33
TIMP1P01033 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.09■□□□□ 0.33
TIMP1P01033 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMP1P01033 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMP1P01033 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMP1P01033 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMP1P01033 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIMP1P01033 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIMP1P01033 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TIMP1P01033 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMP1P01033 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.09■□□□□ 0.33
TIMP1P01033 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TIMP1P01033 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TIMP1P01033 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
TIMP1P01033 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMP1P01033 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMP1P01033 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMP1P01033 NEFHP1-201ENST00000412845 2629 ntBASIC17.08■□□□□ 0.33
TIMP1P01033 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TIMP1P01033 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMP1P01033 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.08■□□□□ 0.33
TIMP1P01033 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMP1P01033 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.08■□□□□ 0.33
TIMP1P01033 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TIMP1P01033 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMP1P01033 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TIMP1P01033 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMP1P01033 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TIMP1P01033 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms