Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
TOP3BO95985 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TOP3BO95985 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.52■□□□□ 0.23
TOP3BO95985 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TOP3BO95985 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.52■□□□□ 0.23
TOP3BO95985 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TOP3BO95985 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TOP3BO95985 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TOP3BO95985 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TOP3BO95985 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.52■□□□□ 0.23
TOP3BO95985 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TOP3BO95985 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.51■□□□□ 0.23
TOP3BO95985 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TOP3BO95985 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TOP3BO95985 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 GPAA1P2-202ENST00000606848 1787 ntBASIC16.51■□□□□ 0.23
TOP3BO95985 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.51■□□□□ 0.23
TOP3BO95985 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TOP3BO95985 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.51■□□□□ 0.23
TOP3BO95985 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.51■□□□□ 0.23
TOP3BO95985 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TOP3BO95985 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.51■□□□□ 0.23
TOP3BO95985 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.51■□□□□ 0.23
TOP3BO95985 AC092580.3-201ENST00000430932 139 ntBASIC16.51■□□□□ 0.23
TOP3BO95985 SPDYE14P-201ENST00000442619 822 ntBASIC16.51■□□□□ 0.23
TOP3BO95985 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.51■□□□□ 0.23
TOP3BO95985 KRT17P7-201ENST00000451704 1104 ntBASIC16.51■□□□□ 0.23
TOP3BO95985 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.51■□□□□ 0.23
TOP3BO95985 AL135744.1-201ENST00000565098 629 ntBASIC16.51■□□□□ 0.23
TOP3BO95985 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.51■□□□□ 0.23
TOP3BO95985 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.51■□□□□ 0.23
TOP3BO95985 AC084346.2-201ENST00000607097 949 ntBASIC16.51■□□□□ 0.23
TOP3BO95985 AL158211.3-201ENST00000607385 239 ntBASIC16.51■□□□□ 0.23
TOP3BO95985 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.51■□□□□ 0.23
TOP3BO95985 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
TOP3BO95985 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.51■□□□□ 0.23
TOP3BO95985 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.51■□□□□ 0.23
TOP3BO95985 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
TOP3BO95985 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TOP3BO95985 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TOP3BO95985 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
TOP3BO95985 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.51■□□□□ 0.23
TOP3BO95985 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TOP3BO95985 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TOP3BO95985 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOP3BO95985 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.51■□□□□ 0.23
TOP3BO95985 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.5■□□□□ 0.23
TOP3BO95985 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TOP3BO95985 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.5■□□□□ 0.23
TOP3BO95985 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.5■□□□□ 0.23
TOP3BO95985 PCGF3-213ENST00000620529 1899 ntBASIC16.5■□□□□ 0.23
TOP3BO95985 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.5■□□□□ 0.23
TOP3BO95985 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TOP3BO95985 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 TSPY26P-202ENST00000565928 3884 ntBASIC16.5■□□□□ 0.23
TOP3BO95985 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.5■□□□□ 0.23
TOP3BO95985 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
TOP3BO95985 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TOP3BO95985 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.5■□□□□ 0.23
TOP3BO95985 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
TOP3BO95985 SPCS2P4-201ENST00000436160 681 ntBASIC16.5■□□□□ 0.23
TOP3BO95985 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.5■□□□□ 0.23
TOP3BO95985 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.5■□□□□ 0.23
TOP3BO95985 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.5■□□□□ 0.23
TOP3BO95985 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.5■□□□□ 0.23
TOP3BO95985 CYP2A7P1-201ENST00000595391 815 ntBASIC16.5■□□□□ 0.23
TOP3BO95985 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.5■□□□□ 0.23
TOP3BO95985 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.5■□□□□ 0.23
TOP3BO95985 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.5■□□□□ 0.23
TOP3BO95985 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 AP003680.1-201ENST00000598970 3660 ntBASIC16.5■□□□□ 0.23
TOP3BO95985 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TOP3BO95985 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.5■□□□□ 0.23
TOP3BO95985 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TOP3BO95985 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms