Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.06■□□□□ 0.48
SORBS3O60504 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.06■□□□□ 0.48
SORBS3O60504 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.06■□□□□ 0.48
SORBS3O60504 AL358472.5-202ENST00000641448 1267 ntBASIC18.06■□□□□ 0.48
SORBS3O60504 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SORBS3O60504 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
SORBS3O60504 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.06■□□□□ 0.48
SORBS3O60504 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.06■□□□□ 0.48
SORBS3O60504 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SORBS3O60504 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
SORBS3O60504 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.06■□□□□ 0.48
SORBS3O60504 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SORBS3O60504 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.06■□□□□ 0.48
SORBS3O60504 AL691432.1-201ENST00000596308 1422 ntBASIC18.06■□□□□ 0.48
SORBS3O60504 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SORBS3O60504 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.06■□□□□ 0.48
SORBS3O60504 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SORBS3O60504 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SORBS3O60504 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.05■□□□□ 0.48
SORBS3O60504 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SORBS3O60504 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.05■□□□□ 0.48
SORBS3O60504 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
SORBS3O60504 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
SORBS3O60504 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SORBS3O60504 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SORBS3O60504 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SORBS3O60504 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.05■□□□□ 0.48
SORBS3O60504 AC098850.1-201ENST00000419919 790 ntBASIC18.05■□□□□ 0.48
SORBS3O60504 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SORBS3O60504 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.05■□□□□ 0.48
SORBS3O60504 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.05■□□□□ 0.48
SORBS3O60504 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.05■□□□□ 0.48
SORBS3O60504 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.05■□□□□ 0.48
SORBS3O60504 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SORBS3O60504 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.05■□□□□ 0.48
SORBS3O60504 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.05■□□□□ 0.48
SORBS3O60504 AC132938.2-201ENST00000579188 680 ntBASIC18.05■□□□□ 0.48
SORBS3O60504 AC025048.3-201ENST00000590609 569 ntBASIC18.05■□□□□ 0.48
SORBS3O60504 LINC01115-203ENST00000606068 577 ntBASIC18.05■□□□□ 0.48
SORBS3O60504 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SORBS3O60504 AC005702.4-201ENST00000618393 416 ntBASIC18.05■□□□□ 0.48
SORBS3O60504 AL591163.1-201ENST00000641757 987 ntBASIC18.05■□□□□ 0.48
SORBS3O60504 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.05■□□□□ 0.48
SORBS3O60504 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SORBS3O60504 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.05■□□□□ 0.48
SORBS3O60504 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.05■□□□□ 0.48
SORBS3O60504 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.05■□□□□ 0.48
SORBS3O60504 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.05■□□□□ 0.48
SORBS3O60504 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.05■□□□□ 0.48
SORBS3O60504 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.05■□□□□ 0.48
SORBS3O60504 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SORBS3O60504 SLC7A15P-201ENST00000424028 1363 ntBASIC18.04■□□□□ 0.48
SORBS3O60504 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 AC134407.2-201ENST00000625089 1978 ntBASIC18.04■□□□□ 0.48
SORBS3O60504 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SORBS3O60504 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SORBS3O60504 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SORBS3O60504 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms