Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.4□□□□□ -0.1
ZIC3O60481 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC3O60481 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC3O60481 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC3O60481 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.4□□□□□ -0.1
ZIC3O60481 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.4□□□□□ -0.1
ZIC3O60481 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ZIC3O60481 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.4□□□□□ -0.1
ZIC3O60481 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC3O60481 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.4□□□□□ -0.1
ZIC3O60481 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.4□□□□□ -0.1
ZIC3O60481 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.4□□□□□ -0.1
ZIC3O60481 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.4□□□□□ -0.1
ZIC3O60481 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.4□□□□□ -0.1
ZIC3O60481 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC3O60481 AC010491.1-201ENST00000563101 2797 ntBASIC14.4□□□□□ -0.1
ZIC3O60481 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC3O60481 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.4□□□□□ -0.1
ZIC3O60481 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC3O60481 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ZIC3O60481 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC3O60481 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC3O60481 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
ZIC3O60481 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.4□□□□□ -0.1
ZIC3O60481 LINC02199-201ENST00000506655 2702 ntBASIC14.4□□□□□ -0.1
ZIC3O60481 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.4□□□□□ -0.1
ZIC3O60481 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC3O60481 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
ZIC3O60481 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC3O60481 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.4□□□□□ -0.1
ZIC3O60481 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
ZIC3O60481 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
ZIC3O60481 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.39□□□□□ -0.11
ZIC3O60481 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZIC3O60481 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZIC3O60481 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.39□□□□□ -0.11
ZIC3O60481 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZIC3O60481 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.39□□□□□ -0.11
ZIC3O60481 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
ZIC3O60481 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZIC3O60481 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.39□□□□□ -0.11
ZIC3O60481 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.39□□□□□ -0.11
ZIC3O60481 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZIC3O60481 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ZIC3O60481 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
ZIC3O60481 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.39□□□□□ -0.11
ZIC3O60481 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
ZIC3O60481 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.39□□□□□ -0.11
ZIC3O60481 TARDBPP1-201ENST00000442013 1203 ntBASIC14.39□□□□□ -0.11
ZIC3O60481 SPTLC1P1-201ENST00000447199 261 ntBASIC14.39□□□□□ -0.11
ZIC3O60481 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.39□□□□□ -0.11
ZIC3O60481 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZIC3O60481 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZIC3O60481 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.39□□□□□ -0.11
ZIC3O60481 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.39□□□□□ -0.11
ZIC3O60481 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.39□□□□□ -0.11
ZIC3O60481 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
ZIC3O60481 AC138761.1-201ENST00000584393 385 ntBASIC14.39□□□□□ -0.11
ZIC3O60481 AC097359.3-201ENST00000603982 1210 ntBASIC14.39□□□□□ -0.11
ZIC3O60481 AC074044.1-201ENST00000609673 707 ntBASIC14.39□□□□□ -0.11
ZIC3O60481 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.39□□□□□ -0.11
ZIC3O60481 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.39□□□□□ -0.11
ZIC3O60481 AC009118.2-201ENST00000613275 655 ntBASIC14.39□□□□□ -0.11
ZIC3O60481 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.39□□□□□ -0.11
ZIC3O60481 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.39□□□□□ -0.11
ZIC3O60481 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.39□□□□□ -0.11
ZIC3O60481 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.39□□□□□ -0.11
ZIC3O60481 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZIC3O60481 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZIC3O60481 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.39□□□□□ -0.11
ZIC3O60481 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZIC3O60481 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.39□□□□□ -0.11
ZIC3O60481 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZIC3O60481 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZIC3O60481 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.39□□□□□ -0.11
ZIC3O60481 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
ZIC3O60481 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZIC3O60481 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZIC3O60481 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.39□□□□□ -0.11
ZIC3O60481 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.38□□□□□ -0.11
ZIC3O60481 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.38□□□□□ -0.11
ZIC3O60481 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZIC3O60481 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms