Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KCNQ3O43525 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNQ3O43525 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.4■□□□□ 0.86
KCNQ3O43525 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNQ3O43525 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNQ3O43525 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
KCNQ3O43525 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.4■□□□□ 0.86
KCNQ3O43525 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 MIR5189-201ENST00000577370 114 ntBASIC20.4■□□□□ 0.86
KCNQ3O43525 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 BTNL10-201ENST00000595971 695 ntBASIC20.4■□□□□ 0.86
KCNQ3O43525 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.4■□□□□ 0.86
KCNQ3O43525 CU634019.7-201ENST00000624153 1185 ntBASIC20.4■□□□□ 0.86
KCNQ3O43525 FP236241.2-201ENST00000624906 1185 ntBASIC20.4■□□□□ 0.86
KCNQ3O43525 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
KCNQ3O43525 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KCNQ3O43525 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KCNQ3O43525 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.86
KCNQ3O43525 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
KCNQ3O43525 MSTO2P-201ENST00000314835 1709 ntBASIC20.39■□□□□ 0.86
KCNQ3O43525 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.39■□□□□ 0.86
KCNQ3O43525 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
KCNQ3O43525 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNQ3O43525 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.39■□□□□ 0.85
KCNQ3O43525 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20.39■□□□□ 0.85
KCNQ3O43525 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNQ3O43525 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNQ3O43525 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNQ3O43525 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNQ3O43525 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.39■□□□□ 0.85
KCNQ3O43525 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.39■□□□□ 0.85
KCNQ3O43525 VDAC1P7-201ENST00000462417 847 ntBASIC20.39■□□□□ 0.85
KCNQ3O43525 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.39■□□□□ 0.85
KCNQ3O43525 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNQ3O43525 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
KCNQ3O43525 SLC25A47P1-201ENST00000531577 414 ntBASIC20.39■□□□□ 0.85
KCNQ3O43525 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNQ3O43525 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.39■□□□□ 0.85
KCNQ3O43525 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.39■□□□□ 0.85
KCNQ3O43525 MIR4313-201ENST00000580760 101 ntBASIC20.39■□□□□ 0.85
KCNQ3O43525 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.39■□□□□ 0.85
KCNQ3O43525 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.39■□□□□ 0.85
KCNQ3O43525 AC133539.2-201ENST00000604757 467 ntBASIC20.39■□□□□ 0.85
KCNQ3O43525 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.39■□□□□ 0.85
KCNQ3O43525 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.39■□□□□ 0.85
KCNQ3O43525 MIR6805-201ENST00000615055 62 ntBASIC20.39■□□□□ 0.85
KCNQ3O43525 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNQ3O43525 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.39■□□□□ 0.85
KCNQ3O43525 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.39■□□□□ 0.85
KCNQ3O43525 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.39■□□□□ 0.85
KCNQ3O43525 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNQ3O43525 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
KCNQ3O43525 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.39■□□□□ 0.85
KCNQ3O43525 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
KCNQ3O43525 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNQ3O43525 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNQ3O43525 TP73-209ENST00000603362 1668 ntTSL 5 BASIC20.38■□□□□ 0.85
KCNQ3O43525 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC20.38■□□□□ 0.85
KCNQ3O43525 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
KCNQ3O43525 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
KCNQ3O43525 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
KCNQ3O43525 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNQ3O43525 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 HLA-V-201ENST00000429037 534 ntBASIC20.38■□□□□ 0.85
KCNQ3O43525 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.38■□□□□ 0.85
KCNQ3O43525 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNQ3O43525 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
KCNQ3O43525 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.38■□□□□ 0.85
KCNQ3O43525 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC20.38■□□□□ 0.85
KCNQ3O43525 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNQ3O43525 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
KCNQ3O43525 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNQ3O43525 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNQ3O43525 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KCNQ3O43525 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ3O43525 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KCNQ3O43525 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.38■□□□□ 0.85
KCNQ3O43525 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ3O43525 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
KCNQ3O43525 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms