Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 GGT4P-201ENST00000623672 1708 ntBASIC15.4■□□□□ 0.06
PCDH17O14917 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDH17O14917 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDH17O14917 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDH17O14917 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDH17O14917 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDH17O14917 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PCDH17O14917 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PCDH17O14917 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PCDH17O14917 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.39■□□□□ 0.05
PCDH17O14917 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PCDH17O14917 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDH17O14917 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.39■□□□□ 0.05
PCDH17O14917 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDH17O14917 COX20P2-201ENST00000452636 358 ntBASIC15.39■□□□□ 0.05
PCDH17O14917 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDH17O14917 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDH17O14917 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDH17O14917 AL138918.1-201ENST00000568306 659 ntBASIC15.39■□□□□ 0.05
PCDH17O14917 AC024267.1-201ENST00000582320 895 ntBASIC15.39■□□□□ 0.05
PCDH17O14917 AC005498.2-205ENST00000593218 784 ntBASIC15.39■□□□□ 0.05
PCDH17O14917 AC007967.4-201ENST00000614700 386 ntBASIC15.39■□□□□ 0.05
PCDH17O14917 MIR6080-201ENST00000617359 66 ntBASIC15.39■□□□□ 0.05
PCDH17O14917 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDH17O14917 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDH17O14917 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PCDH17O14917 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDH17O14917 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PCDH17O14917 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDH17O14917 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDH17O14917 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDH17O14917 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH17O14917 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
PCDH17O14917 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH17O14917 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH17O14917 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH17O14917 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH17O14917 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PCDH17O14917 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PCDH17O14917 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH17O14917 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH17O14917 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 AL353705.2-201ENST00000428243 662 ntBASIC15.38■□□□□ 0.05
PCDH17O14917 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH17O14917 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH17O14917 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH17O14917 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH17O14917 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDH17O14917 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.38■□□□□ 0.05
PCDH17O14917 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.38■□□□□ 0.05
PCDH17O14917 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH17O14917 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDH17O14917 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH17O14917 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH17O14917 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH17O14917 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 AL031731.1-201ENST00000642131 2094 ntBASIC15.38■□□□□ 0.05
PCDH17O14917 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH17O14917 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.38■□□□□ 0.05
PCDH17O14917 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH17O14917 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 AC006449.6-201ENST00000612330 2296 ntBASIC15.38■□□□□ 0.05
PCDH17O14917 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms