Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 PHKG1P2-201ENST00000457537 863 ntBASIC21.08■□□□□ 0.97
APAF1O14727 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.08■□□□□ 0.97
APAF1O14727 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
APAF1O14727 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
APAF1O14727 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.08■□□□□ 0.97
APAF1O14727 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
APAF1O14727 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
APAF1O14727 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
APAF1O14727 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.96
APAF1O14727 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
APAF1O14727 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
APAF1O14727 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
APAF1O14727 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC21.08■□□□□ 0.96
APAF1O14727 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.08■□□□□ 0.96
APAF1O14727 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.08■□□□□ 0.96
APAF1O14727 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
APAF1O14727 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
APAF1O14727 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
APAF1O14727 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
APAF1O14727 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
APAF1O14727 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
APAF1O14727 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
APAF1O14727 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
APAF1O14727 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
APAF1O14727 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.07■□□□□ 0.96
APAF1O14727 CICP13-201ENST00000422015 2789 ntBASIC21.07■□□□□ 0.96
APAF1O14727 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC21.07■□□□□ 0.96
APAF1O14727 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
APAF1O14727 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
APAF1O14727 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.07■□□□□ 0.96
APAF1O14727 AC027369.6-201ENST00000525520 931 ntBASIC21.07■□□□□ 0.96
APAF1O14727 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.07■□□□□ 0.96
APAF1O14727 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.07■□□□□ 0.96
APAF1O14727 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.07■□□□□ 0.96
APAF1O14727 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.07■□□□□ 0.96
APAF1O14727 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC21.07■□□□□ 0.96
APAF1O14727 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
APAF1O14727 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.07■□□□□ 0.96
APAF1O14727 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
APAF1O14727 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
APAF1O14727 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
APAF1O14727 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC21.07■□□□□ 0.96
APAF1O14727 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC21.07■□□□□ 0.96
APAF1O14727 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.07■□□□□ 0.96
APAF1O14727 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
APAF1O14727 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC21.07■□□□□ 0.96
APAF1O14727 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
APAF1O14727 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
APAF1O14727 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
APAF1O14727 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
APAF1O14727 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
APAF1O14727 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC21.06■□□□□ 0.96
APAF1O14727 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
APAF1O14727 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
APAF1O14727 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC21.06■□□□□ 0.96
APAF1O14727 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC21.06■□□□□ 0.96
APAF1O14727 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
APAF1O14727 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
APAF1O14727 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
APAF1O14727 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
APAF1O14727 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
APAF1O14727 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
APAF1O14727 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.06■□□□□ 0.96
APAF1O14727 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.06■□□□□ 0.96
APAF1O14727 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.06■□□□□ 0.96
APAF1O14727 AL512361.1-201ENST00000554200 418 ntBASIC21.06■□□□□ 0.96
APAF1O14727 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.06■□□□□ 0.96
APAF1O14727 AC027796.2-201ENST00000575326 344 ntBASIC21.06■□□□□ 0.96
APAF1O14727 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.06■□□□□ 0.96
APAF1O14727 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
APAF1O14727 AL450472.2-201ENST00000603663 1156 ntBASIC21.06■□□□□ 0.96
APAF1O14727 AC097359.3-201ENST00000603982 1210 ntBASIC21.06■□□□□ 0.96
APAF1O14727 AL158211.3-201ENST00000607385 239 ntBASIC21.06■□□□□ 0.96
APAF1O14727 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
APAF1O14727 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
APAF1O14727 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
APAF1O14727 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC21.06■□□□□ 0.96
APAF1O14727 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC21.06■□□□□ 0.96
APAF1O14727 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
APAF1O14727 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
APAF1O14727 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
APAF1O14727 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms