Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CHL1O00533 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC20.45■□□□□ 0.86
CHL1O00533 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CHL1O00533 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHL1O00533 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC20.45■□□□□ 0.86
CHL1O00533 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHL1O00533 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.45■□□□□ 0.86
CHL1O00533 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.45■□□□□ 0.86
CHL1O00533 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.45■□□□□ 0.86
CHL1O00533 ELK1P1-201ENST00000485699 580 ntBASIC20.45■□□□□ 0.86
CHL1O00533 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.45■□□□□ 0.86
CHL1O00533 AC123567.1-201ENST00000548294 1261 ntBASIC20.45■□□□□ 0.86
CHL1O00533 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.45■□□□□ 0.86
CHL1O00533 CTBP2P3-201ENST00000585629 1255 ntBASIC20.45■□□□□ 0.86
CHL1O00533 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.45■□□□□ 0.86
CHL1O00533 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.45■□□□□ 0.86
CHL1O00533 AC027307.3-201ENST00000594262 1100 ntBASIC20.45■□□□□ 0.86
CHL1O00533 AC093726.1-201ENST00000608064 963 ntBASIC20.45■□□□□ 0.86
CHL1O00533 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
CHL1O00533 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CHL1O00533 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CHL1O00533 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHL1O00533 PCDHA1-201ENST00000378133 2726 ntBASIC20.45■□□□□ 0.86
CHL1O00533 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHL1O00533 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.45■□□□□ 0.86
CHL1O00533 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHL1O00533 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CHL1O00533 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CHL1O00533 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.44■□□□□ 0.86
CHL1O00533 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CHL1O00533 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CHL1O00533 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.44■□□□□ 0.86
CHL1O00533 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.44■□□□□ 0.86
CHL1O00533 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.44■□□□□ 0.86
CHL1O00533 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CHL1O00533 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.44■□□□□ 0.86
CHL1O00533 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.44■□□□□ 0.86
CHL1O00533 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHL1O00533 NME2P1-201ENST00000426182 414 ntBASIC20.44■□□□□ 0.86
CHL1O00533 RN7SL692P-201ENST00000464677 288 ntBASIC20.44■□□□□ 0.86
CHL1O00533 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.44■□□□□ 0.86
CHL1O00533 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.44■□□□□ 0.86
CHL1O00533 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.44■□□□□ 0.86
CHL1O00533 AC012645.4-201ENST00000610691 1061 ntBASIC20.44■□□□□ 0.86
CHL1O00533 AC007431.3-201ENST00000623221 587 ntBASIC20.44■□□□□ 0.86
CHL1O00533 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHL1O00533 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.44■□□□□ 0.86
CHL1O00533 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.44■□□□□ 0.86
CHL1O00533 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHL1O00533 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.44■□□□□ 0.86
CHL1O00533 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHL1O00533 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.43■□□□□ 0.86
CHL1O00533 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHL1O00533 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHL1O00533 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHL1O00533 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHL1O00533 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CHL1O00533 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHL1O00533 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHL1O00533 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHL1O00533 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHL1O00533 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHL1O00533 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.43■□□□□ 0.86
CHL1O00533 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHL1O00533 COX5BP8-201ENST00000416911 349 ntBASIC20.43■□□□□ 0.86
CHL1O00533 MYCLP2-201ENST00000449268 967 ntBASIC20.43■□□□□ 0.86
CHL1O00533 TMEM261P1-201ENST00000604899 340 ntBASIC20.43■□□□□ 0.86
CHL1O00533 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.43■□□□□ 0.86
CHL1O00533 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CHL1O00533 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CHL1O00533 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHL1O00533 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHL1O00533 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CHL1O00533 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHL1O00533 AL365203.3-201ENST00000609742 2057 ntBASIC20.42■□□□□ 0.86
CHL1O00533 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHL1O00533 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CHL1O00533 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHL1O00533 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHL1O00533 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms