Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 PI4KAP1-204ENST00000612579 1703 ntBASIC11.33□□□□□ -0.6
LINC01546A6NGU7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 PTCHD3P3-201ENST00000403073 906 ntBASIC11.33□□□□□ -0.6
LINC01546A6NGU7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 POM121L3P-201ENST00000419331 1163 ntBASIC11.33□□□□□ -0.6
LINC01546A6NGU7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 MINOS1P3-201ENST00000457048 203 ntBASIC11.33□□□□□ -0.6
LINC01546A6NGU7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.33□□□□□ -0.6
LINC01546A6NGU7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 AP002469.2-201ENST00000531724 424 ntBASIC11.32□□□□□ -0.6
LINC01546A6NGU7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 Z69720.1-201ENST00000601483 472 ntBASIC11.32□□□□□ -0.6
LINC01546A6NGU7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 AC113367.3-201ENST00000508316 1912 ntBASIC11.32□□□□□ -0.6
LINC01546A6NGU7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 AC063926.3-201ENST00000624734 5658 ntBASIC11.32□□□□□ -0.6
LINC01546A6NGU7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 NORAD-201ENST00000565493 5339 ntBASIC11.32□□□□□ -0.6
LINC01546A6NGU7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01546A6NGU7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
LINC01546A6NGU7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01546A6NGU7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01546A6NGU7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01546A6NGU7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01546A6NGU7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01546A6NGU7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01546A6NGU7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC01546A6NGU7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms