Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
MBD3L3A6NE82 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
MBD3L3A6NE82 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14□□□□□ -0.17
MBD3L3A6NE82 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14□□□□□ -0.17
MBD3L3A6NE82 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 ACA64.2-201ENST00000459014 129 ntBASIC14□□□□□ -0.17
MBD3L3A6NE82 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14□□□□□ -0.17
MBD3L3A6NE82 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14□□□□□ -0.17
MBD3L3A6NE82 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14□□□□□ -0.17
MBD3L3A6NE82 AC017083.2-201ENST00000608069 979 ntBASIC14□□□□□ -0.17
MBD3L3A6NE82 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
MBD3L3A6NE82 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14□□□□□ -0.17
MBD3L3A6NE82 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14□□□□□ -0.17
MBD3L3A6NE82 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
MBD3L3A6NE82 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
MBD3L3A6NE82 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14□□□□□ -0.17
MBD3L3A6NE82 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 KRT8P22-201ENST00000562317 1415 ntBASIC13.99□□□□□ -0.17
MBD3L3A6NE82 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.99□□□□□ -0.17
MBD3L3A6NE82 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 AC112492.5-201ENST00000421897 457 ntBASIC13.99□□□□□ -0.17
MBD3L3A6NE82 TMEM14DP-201ENST00000422205 345 ntBASIC13.99□□□□□ -0.17
MBD3L3A6NE82 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.99□□□□□ -0.17
MBD3L3A6NE82 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 RAB43P1-201ENST00000561790 589 ntBASIC13.99□□□□□ -0.17
MBD3L3A6NE82 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 AC010319.3-201ENST00000597028 470 ntBASIC13.99□□□□□ -0.17
MBD3L3A6NE82 AC000095.1-201ENST00000603208 874 ntBASIC13.99□□□□□ -0.17
MBD3L3A6NE82 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 PCDHA12-202ENST00000613593 2588 ntBASIC13.99□□□□□ -0.17
MBD3L3A6NE82 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MBD3L3A6NE82 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MBD3L3A6NE82 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms