Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.14■□□□□ 0.01
IFT52Q9Y366 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFT52Q9Y366 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFT52Q9Y366 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFT52Q9Y366 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 AC068587.6-202ENST00000641839 5619 ntBASIC15.13■□□□□ 0.01
IFT52Q9Y366 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 AL137784.3-201ENST00000623858 2288 ntBASIC15.13■□□□□ 0.01
IFT52Q9Y366 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFT52Q9Y366 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFT52Q9Y366 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFT52Q9Y366 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFT52Q9Y366 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IFT52Q9Y366 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 AC093724.1-201ENST00000448659 1027 ntBASIC15.13■□□□□ 0.01
IFT52Q9Y366 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFT52Q9Y366 AP005117.1-202ENST00000581724 1908 ntBASIC15.13■□□□□ 0.01
IFT52Q9Y366 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFT52Q9Y366 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFT52Q9Y366 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
IFT52Q9Y366 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 AC069224.1-201ENST00000566372 1715 ntBASIC15.12■□□□□ 0.01
IFT52Q9Y366 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 AC140658.5-201ENST00000438532 169 ntBASIC15.12■□□□□ 0.01
IFT52Q9Y366 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 AL365330.1-201ENST00000607459 531 ntBASIC15.12■□□□□ 0.01
IFT52Q9Y366 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 AC112504.1-201ENST00000623415 1841 ntBASIC15.12■□□□□ 0.01
IFT52Q9Y366 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 HLA-A-201ENST00000376802 1334 ntBASIC15.12■□□□□ 0.01
IFT52Q9Y366 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.12■□□□□ 0.01
IFT52Q9Y366 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFT52Q9Y366 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
IFT52Q9Y366 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms