Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 AL607033.1-201ENST00000623900 1599 ntBASIC21.78■■□□□ 1.08
NINLQ9Y2I6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 AC069224.1-201ENST00000566372 1715 ntBASIC21.77■■□□□ 1.08
NINLQ9Y2I6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NINLQ9Y2I6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NINLQ9Y2I6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC21.77■■□□□ 1.07
NINLQ9Y2I6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
NINLQ9Y2I6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 PCDHB19P-201ENST00000570871 2371 ntBASIC21.76■■□□□ 1.07
NINLQ9Y2I6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 FAM86MP-201ENST00000340703 885 ntBASIC21.76■■□□□ 1.07
NINLQ9Y2I6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 RPSAP52-203ENST00000622976 1023 ntBASIC21.76■■□□□ 1.07
NINLQ9Y2I6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 CDC14C-201ENST00000428251 1719 ntBASIC21.76■■□□□ 1.07
NINLQ9Y2I6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 AL596087.1-201ENST00000400979 1969 ntBASIC21.76■■□□□ 1.07
NINLQ9Y2I6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NINLQ9Y2I6 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 AC112492.5-201ENST00000421897 457 ntBASIC21.75■■□□□ 1.07
NINLQ9Y2I6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 FAM86LP-201ENST00000478302 853 ntBASIC21.75■■□□□ 1.07
NINLQ9Y2I6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.75■■□□□ 1.07
NINLQ9Y2I6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 AC132938.2-201ENST00000579188 680 ntBASIC21.75■■□□□ 1.07
NINLQ9Y2I6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 AL591163.1-201ENST00000641757 987 ntBASIC21.75■■□□□ 1.07
NINLQ9Y2I6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NINLQ9Y2I6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms