Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 LINC00554-201ENST00000564841 3011 ntBASIC15.12■□□□□ 0.01
CTSFQ9UBX1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AL691432.1-201ENST00000596308 1422 ntBASIC15.12■□□□□ 0.01
CTSFQ9UBX1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AC006449.6-201ENST00000612330 2296 ntBASIC15.12■□□□□ 0.01
CTSFQ9UBX1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AC004790.1-201ENST00000612686 536 ntBASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AL109936.8-201ENST00000641772 604 ntBASIC15.12■□□□□ 0.01
CTSFQ9UBX1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 BTBD7P1-201ENST00000447253 1453 ntBASIC15.12■□□□□ 0.01
CTSFQ9UBX1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 AL136379.1-201ENST00000623471 2642 ntBASIC15.12■□□□□ 0.01
CTSFQ9UBX1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTSFQ9UBX1 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 PIN1P1-201ENST00000412108 996 ntBASIC15.11■□□□□ 0.01
CTSFQ9UBX1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 HIST3H2BA-201ENST00000436555 524 ntBASIC15.11■□□□□ 0.01
CTSFQ9UBX1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 GNAQP1-201ENST00000444815 1067 ntBASIC15.11■□□□□ 0.01
CTSFQ9UBX1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 AC243562.2-201ENST00000561247 970 ntBASIC15.11■□□□□ 0.01
CTSFQ9UBX1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 AF228730.6-201ENST00000641497 218 ntBASIC15.11■□□□□ 0.01
CTSFQ9UBX1 AC084121.3-201ENST00000641716 218 ntBASIC15.11■□□□□ 0.01
CTSFQ9UBX1 AC105233.6-201ENST00000642093 218 ntBASIC15.11■□□□□ 0.01
CTSFQ9UBX1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSFQ9UBX1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.1■□□□□ 0.01
CTSFQ9UBX1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CTSFQ9UBX1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSFQ9UBX1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms