Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SDHAF3Q9NRP4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SDHAF3Q9NRP4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SDHAF3Q9NRP4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.81□□□□□ -0.04
SDHAF3Q9NRP4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SDHAF3Q9NRP4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SDHAF3Q9NRP4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SDHAF3Q9NRP4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SDHAF3Q9NRP4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SDHAF3Q9NRP4 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.81□□□□□ -0.04
SDHAF3Q9NRP4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.81□□□□□ -0.04
SDHAF3Q9NRP4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AL596087.1-201ENST00000400979 1969 ntBASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 FAM86GP-201ENST00000448322 971 ntBASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AC109322.1-201ENST00000524499 1264 ntBASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AC243562.2-201ENST00000561247 970 ntBASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AC007326.2-201ENST00000624224 7579 ntBASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SDHAF3Q9NRP4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 AL139400.1-201ENST00000366220 510 ntBASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 AC092183.1-201ENST00000469884 875 ntBASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SDHAF3Q9NRP4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms