Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 FAM220BP-201ENST00000377689 816 ntBASIC14.12□□□□□ -0.15
CDH20Q9HBT6 FAM58DP-201ENST00000428076 619 ntBASIC14.12□□□□□ -0.15
CDH20Q9HBT6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH20Q9HBT6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.11□□□□□ -0.15
CDH20Q9HBT6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 RARRES2P9-201ENST00000565168 469 ntBASIC14.11□□□□□ -0.15
CDH20Q9HBT6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 AP3S2-216ENST00000617003 1561 ntBASIC14.11□□□□□ -0.15
CDH20Q9HBT6 LINC00628-201ENST00000628516 1289 ntBASIC14.11□□□□□ -0.15
CDH20Q9HBT6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH20Q9HBT6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH20Q9HBT6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH20Q9HBT6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH20Q9HBT6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CDH20Q9HBT6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH20Q9HBT6 FOXO1B-201ENST00000504678 1527 ntBASIC14.1□□□□□ -0.15
CDH20Q9HBT6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms