Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 ALG1L5P-201ENST00000482043 771 ntBASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 AC243562.2-201ENST00000561247 970 ntBASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 MST1L-201ENST00000442552 2185 ntBASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 AC134407.2-201ENST00000625089 1978 ntBASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC40Q9H9A6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 AC092384.3-202ENST00000564646 2873 ntBASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 HLA-H-201ENST00000383620 1096 ntBASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 DNAJB3-201ENST00000446806 729 ntBASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 TSPY26P-202ENST00000565928 3884 ntBASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC40Q9H9A6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
LRRC40Q9H9A6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRC40Q9H9A6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms