Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 AP006294.1-201ENST00000415407 339 ntBASIC17.27■□□□□ 0.36
NXF3Q9H4D5 ELK1P1-201ENST00000485699 580 ntBASIC17.27■□□□□ 0.36
NXF3Q9H4D5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 HNRNPUP1-201ENST00000554987 333 ntBASIC17.27■□□□□ 0.36
NXF3Q9H4D5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.27■□□□□ 0.35
NXF3Q9H4D5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 AC098614.1-201ENST00000368528 745 ntBASIC17.26■□□□□ 0.35
NXF3Q9H4D5 MIR648-201ENST00000385046 94 ntBASIC17.26■□□□□ 0.35
NXF3Q9H4D5 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 KRT18P64-201ENST00000434946 1219 ntBASIC17.26■□□□□ 0.35
NXF3Q9H4D5 KRT17P7-201ENST00000451704 1104 ntBASIC17.26■□□□□ 0.35
NXF3Q9H4D5 INE1-201ENST00000456273 945 ntBASIC17.26■□□□□ 0.35
NXF3Q9H4D5 PHKG1P2-201ENST00000457537 863 ntBASIC17.26■□□□□ 0.35
NXF3Q9H4D5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 CTBP2P3-201ENST00000585629 1255 ntBASIC17.26■□□□□ 0.35
NXF3Q9H4D5 AC093726.1-201ENST00000608064 963 ntBASIC17.26■□□□□ 0.35
NXF3Q9H4D5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
NXF3Q9H4D5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 RN7SL752P-201ENST00000463779 287 ntBASIC17.25■□□□□ 0.35
NXF3Q9H4D5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 RARRES2P5-201ENST00000564013 466 ntBASIC17.25■□□□□ 0.35
NXF3Q9H4D5 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 AL450472.2-201ENST00000603663 1156 ntBASIC17.25■□□□□ 0.35
NXF3Q9H4D5 AL391069.4-201ENST00000609583 481 ntBASIC17.25■□□□□ 0.35
NXF3Q9H4D5 MIR8072-201ENST00000614241 80 ntBASIC17.25■□□□□ 0.35
NXF3Q9H4D5 IGHV3-72-202ENST00000621503 303 ntBASIC17.25■□□□□ 0.35
NXF3Q9H4D5 AL158212.4-201ENST00000624062 1286 ntBASIC17.25■□□□□ 0.35
NXF3Q9H4D5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NXF3Q9H4D5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms