Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TSPY26P-202ENST00000565928 3884 ntBASIC14.94□□□□□ -0.02
UBQLN3Q9H347 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.94□□□□□ -0.02
UBQLN3Q9H347 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 LINC02447-202ENST00000501888 2146 ntBASIC14.94□□□□□ -0.02
UBQLN3Q9H347 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 AC112504.1-201ENST00000623415 1841 ntBASIC14.94□□□□□ -0.02
UBQLN3Q9H347 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 AC092384.3-202ENST00000564646 2873 ntBASIC14.94□□□□□ -0.02
UBQLN3Q9H347 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 AP005117.1-202ENST00000581724 1908 ntBASIC14.94□□□□□ -0.02
UBQLN3Q9H347 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBQLN3Q9H347 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 CNN2P2-201ENST00000443536 909 ntBASIC14.93□□□□□ -0.02
UBQLN3Q9H347 CNN2P3-201ENST00000450201 906 ntBASIC14.93□□□□□ -0.02
UBQLN3Q9H347 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 AC051619.7-201ENST00000568314 623 ntBASIC14.93□□□□□ -0.02
UBQLN3Q9H347 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 AC106028.4-201ENST00000614509 607 ntBASIC14.93□□□□□ -0.02
UBQLN3Q9H347 AL136317.3-201ENST00000618497 906 ntBASIC14.93□□□□□ -0.02
UBQLN3Q9H347 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBQLN3Q9H347 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 SPDYE7P-202ENST00000420373 878 ntBASIC14.92□□□□□ -0.02
UBQLN3Q9H347 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
UBQLN3Q9H347 AC093724.1-201ENST00000448659 1027 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms