Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SSBP3Q9BWW4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 MIR3197-201ENST00000582241 73 ntBASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 AL138828.2-201ENST00000615812 383 ntBASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
SSBP3Q9BWW4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
SSBP3Q9BWW4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.46□□□□□ -0.26
SSBP3Q9BWW4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SSBP3Q9BWW4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SSBP3Q9BWW4 AC100757.3-201ENST00000622361 1406 ntBASIC13.46□□□□□ -0.26
SSBP3Q9BWW4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SSBP3Q9BWW4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SSBP3Q9BWW4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 MIR4321-201ENST00000592276 80 ntBASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 AC092171.3-201ENST00000610122 2651 ntBASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SSBP3Q9BWW4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms