Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC004877.2-201ENST00000623941 599 ntBASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM56Q9BRZ2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 BCAR1-209ENST00000546196 1340 ntBASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 AC008677.1-201ENST00000519230 1561 ntBASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM56Q9BRZ2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 U82695.1-201ENST00000635752 1889 ntBASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 AC023824.1-201ENST00000562945 2975 ntBASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 SLC25A1P1-201ENST00000528351 927 ntBASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 KRT19P2-202ENST00000557173 1012 ntBASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 AC023141.13-201ENST00000604991 943 ntBASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 AL513190.1-201ENST00000621254 727 ntBASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM56Q9BRZ2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms