Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CASD1Q96PB1 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.98■□□□□ 0.31
CASD1Q96PB1 MIR4538-201ENST00000581377 78 ntBASIC16.98■□□□□ 0.31
CASD1Q96PB1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.98■□□□□ 0.31
CASD1Q96PB1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.98■□□□□ 0.31
CASD1Q96PB1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.98■□□□□ 0.31
CASD1Q96PB1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CASD1Q96PB1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.98■□□□□ 0.31
CASD1Q96PB1 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CASD1Q96PB1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASD1Q96PB1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASD1Q96PB1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASD1Q96PB1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CASD1Q96PB1 MSTO2P-201ENST00000314835 1709 ntBASIC16.98■□□□□ 0.31
CASD1Q96PB1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASD1Q96PB1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.98■□□□□ 0.31
CASD1Q96PB1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.98■□□□□ 0.31
CASD1Q96PB1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CASD1Q96PB1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CASD1Q96PB1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.98■□□□□ 0.31
CASD1Q96PB1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.98■□□□□ 0.31
CASD1Q96PB1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 AL121723.1-201ENST00000445194 1519 ntBASIC16.97■□□□□ 0.31
CASD1Q96PB1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 BAATP1-201ENST00000412284 1225 ntBASIC16.97■□□□□ 0.31
CASD1Q96PB1 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 RPL7P3-201ENST00000441388 714 ntBASIC16.97■□□□□ 0.31
CASD1Q96PB1 CSF2RBP1-201ENST00000447905 391 ntBASIC16.97■□□□□ 0.31
CASD1Q96PB1 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 AC009486.1-201ENST00000569860 813 ntBASIC16.97■□□□□ 0.31
CASD1Q96PB1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 AC005252.2-201ENST00000624630 1141 ntBASIC16.97■□□□□ 0.31
CASD1Q96PB1 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASD1Q96PB1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.97■□□□□ 0.31
CASD1Q96PB1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASD1Q96PB1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASD1Q96PB1 AC006449.6-201ENST00000612330 2296 ntBASIC16.96■□□□□ 0.31
CASD1Q96PB1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CASD1Q96PB1 AC018892.3-201ENST00000623986 2499 ntBASIC16.96■□□□□ 0.31
CASD1Q96PB1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CASD1Q96PB1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CASD1Q96PB1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASD1Q96PB1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
CASD1Q96PB1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.96■□□□□ 0.31
CASD1Q96PB1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CASD1Q96PB1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASD1Q96PB1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASD1Q96PB1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CASD1Q96PB1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASD1Q96PB1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASD1Q96PB1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CASD1Q96PB1 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASD1Q96PB1 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CASD1Q96PB1 MIR1908-201ENST00000410394 80 ntBASIC16.96■□□□□ 0.31
CASD1Q96PB1 ACTBP11-201ENST00000436287 1126 ntBASIC16.96■□□□□ 0.31
CASD1Q96PB1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.96■□□□□ 0.31
CASD1Q96PB1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASD1Q96PB1 AC093433.1-201ENST00000458048 571 ntBASIC16.96■□□□□ 0.31
CASD1Q96PB1 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.96■□□□□ 0.31
CASD1Q96PB1 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.96■□□□□ 0.31
CASD1Q96PB1 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.96■□□□□ 0.31
CASD1Q96PB1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.96■□□□□ 0.31
CASD1Q96PB1 MIR4525-201ENST00000580000 75 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms