Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NLRP3Q96P20 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NLRP3Q96P20 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.7■□□□□ 0.74
NLRP3Q96P20 FAM8A2P-201ENST00000528813 1142 ntBASIC19.7■□□□□ 0.74
NLRP3Q96P20 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.7■□□□□ 0.74
NLRP3Q96P20 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.7■□□□□ 0.74
NLRP3Q96P20 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
NLRP3Q96P20 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.7■□□□□ 0.74
NLRP3Q96P20 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.7■□□□□ 0.74
NLRP3Q96P20 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NLRP3Q96P20 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
NLRP3Q96P20 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NLRP3Q96P20 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NLRP3Q96P20 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.7■□□□□ 0.74
NLRP3Q96P20 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.7■□□□□ 0.74
NLRP3Q96P20 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 ALOX12P2-203ENST00000570921 1945 ntBASIC19.69■□□□□ 0.74
NLRP3Q96P20 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 RPL7P3-201ENST00000441388 714 ntBASIC19.69■□□□□ 0.74
NLRP3Q96P20 AL355864.2-201ENST00000447420 863 ntBASIC19.69■□□□□ 0.74
NLRP3Q96P20 FO681548.1-201ENST00000455617 1132 ntBASIC19.69■□□□□ 0.74
NLRP3Q96P20 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 VDAC1P7-201ENST00000462417 847 ntBASIC19.69■□□□□ 0.74
NLRP3Q96P20 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 HNRNPUP1-201ENST00000554987 333 ntBASIC19.69■□□□□ 0.74
NLRP3Q96P20 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 AC009486.1-201ENST00000569860 813 ntBASIC19.69■□□□□ 0.74
NLRP3Q96P20 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
NLRP3Q96P20 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRP3Q96P20 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRP3Q96P20 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRP3Q96P20 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRP3Q96P20 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRP3Q96P20 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRP3Q96P20 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRP3Q96P20 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NLRP3Q96P20 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRP3Q96P20 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRP3Q96P20 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRP3Q96P20 MIR1908-201ENST00000410394 80 ntBASIC19.68■□□□□ 0.74
NLRP3Q96P20 BAATP1-201ENST00000412284 1225 ntBASIC19.68■□□□□ 0.74
NLRP3Q96P20 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 RNA5SP412-201ENST00000516234 123 ntBASIC19.68■□□□□ 0.74
NLRP3Q96P20 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 CLUHP6-201ENST00000580789 941 ntBASIC19.68■□□□□ 0.74
NLRP3Q96P20 RN7SL219P-201ENST00000582872 296 ntBASIC19.68■□□□□ 0.74
NLRP3Q96P20 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NLRP3Q96P20 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms