Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.14■□□□□ 0.66
DDX11Q96FC9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX11Q96FC9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX11Q96FC9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX11Q96FC9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX11Q96FC9 LINC00554-201ENST00000564841 3011 ntBASIC19.14■□□□□ 0.65
DDX11Q96FC9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX11Q96FC9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 PRAL-201ENST00000624952 3286 ntBASIC19.14■□□□□ 0.65
DDX11Q96FC9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX11Q96FC9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX11Q96FC9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX11Q96FC9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX11Q96FC9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX11Q96FC9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX11Q96FC9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX11Q96FC9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX11Q96FC9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 MIR346-201ENST00000362234 95 ntBASIC19.13■□□□□ 0.65
DDX11Q96FC9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.13■□□□□ 0.65
DDX11Q96FC9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX11Q96FC9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.12■□□□□ 0.65
DDX11Q96FC9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 AL592424.1-201ENST00000563624 1536 ntBASIC19.12■□□□□ 0.65
DDX11Q96FC9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX11Q96FC9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.12■□□□□ 0.65
DDX11Q96FC9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms