Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.15■□□□□ 0.34
LMO3Q8TAP4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
LMO3Q8TAP4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 FO393414.2-201ENST00000405153 598 ntBASIC17.14■□□□□ 0.33
LMO3Q8TAP4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 SPDYE7P-202ENST00000420373 878 ntBASIC17.14■□□□□ 0.33
LMO3Q8TAP4 TSEN15P1-201ENST00000423257 515 ntBASIC17.14■□□□□ 0.33
LMO3Q8TAP4 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.14■□□□□ 0.33
LMO3Q8TAP4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 AL079307.3-201ENST00000556114 283 ntBASIC17.14■□□□□ 0.33
LMO3Q8TAP4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 AP001160.2-201ENST00000596071 487 ntBASIC17.14■□□□□ 0.33
LMO3Q8TAP4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 AL691403.2-201ENST00000618460 490 ntBASIC17.14■□□□□ 0.33
LMO3Q8TAP4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO3Q8TAP4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 AL607033.1-201ENST00000623900 1599 ntBASIC17.13■□□□□ 0.33
LMO3Q8TAP4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO3Q8TAP4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms