Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 RPL17P11-201ENST00000417593 544 ntBASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 AP001582.1-201ENST00000525856 295 ntBASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC10.57□□□□□ -0.72
VPS13DQ5THJ4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 AC009486.1-201ENST00000569860 813 ntBASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 AC106886.4-201ENST00000623557 2502 ntBASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 FGFR3P5-201ENST00000564496 886 ntBASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 AC106820.2-201ENST00000563775 3264 ntBASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 KLF2P2-201ENST00000416807 1039 ntBASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 FNTAP2-201ENST00000430308 634 ntBASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 AC005077.2-201ENST00000449786 690 ntBASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 NDUFV2P1-201ENST00000596415 907 ntBASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VPS13DQ5THJ4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 AHCYP2-201ENST00000430630 1300 ntBASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 ACR-203ENST00000529621 708 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC10.55□□□□□ -0.72
VPS13DQ5THJ4 IMP3P2-201ENST00000489760 475 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms