Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 RRP7BP-205ENST00000566851 833 ntBASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 TMEM261P1-201ENST00000604899 340 ntBASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 CLK3P2-201ENST00000427566 1453 ntBASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNFT1Q5M7Z0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 AL162274.1-201ENST00000617191 1098 ntBASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNFT1Q5M7Z0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 AC112492.5-201ENST00000421897 457 ntBASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 KRT18P64-201ENST00000434946 1219 ntBASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 TTTY23B-201ENST00000442790 549 ntBASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 RN7SL399P-201ENST00000471648 279 ntBASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 AC092552.1-201ENST00000547243 906 ntBASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNFT1Q5M7Z0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms