Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AP000812.2-201ENST00000538934 718 ntBASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 MIR6869-201ENST00000619434 62 ntBASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM71Q2Q1W2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.39■□□□□ 0.38
TRIM71Q2Q1W2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM71Q2Q1W2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM71Q2Q1W2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM71Q2Q1W2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 FO681548.1-201ENST00000455617 1132 ntBASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 RNA5SP412-201ENST00000516234 123 ntBASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 PTP4A1P2-201ENST00000546033 454 ntBASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 AC005052.1-201ENST00000625181 2492 ntBASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 AC134407.2-201ENST00000625089 1978 ntBASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM71Q2Q1W2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 AC000095.1-201ENST00000603208 874 ntBASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 AC005252.2-201ENST00000624630 1141 ntBASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 AC106820.2-201ENST00000563775 3264 ntBASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 REXO1L1P-202ENST00000608646 1974 ntBASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 TUBB1P2-201ENST00000422712 1306 ntBASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 TUBB1P1-201ENST00000503144 1300 ntBASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 MSTO2P-201ENST00000314835 1709 ntBASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms