Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NKX6-1P78426 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX6-1P78426 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NKX6-1P78426 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NKX6-1P78426 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
NKX6-1P78426 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX6-1P78426 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX6-1P78426 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX6-1P78426 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NKX6-1P78426 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NKX6-1P78426 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
NKX6-1P78426 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
NKX6-1P78426 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.25□□□□□ -0.13
NKX6-1P78426 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.25□□□□□ -0.13
NKX6-1P78426 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX6-1P78426 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NKX6-1P78426 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX6-1P78426 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.25□□□□□ -0.13
NKX6-1P78426 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NKX6-1P78426 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.25□□□□□ -0.13
NKX6-1P78426 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX6-1P78426 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX6-1P78426 AL596325.1-201ENST00000563991 1082 ntBASIC14.25□□□□□ -0.13
NKX6-1P78426 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX6-1P78426 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.25□□□□□ -0.13
NKX6-1P78426 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.25□□□□□ -0.13
NKX6-1P78426 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX6-1P78426 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NKX6-1P78426 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 AC005052.1-201ENST00000625181 2492 ntBASIC14.25□□□□□ -0.13
NKX6-1P78426 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX6-1P78426 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 RNF216P1-203ENST00000404404 2427 ntBASIC14.25□□□□□ -0.13
NKX6-1P78426 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NKX6-1P78426 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NKX6-1P78426 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 LINC02199-201ENST00000506655 2702 ntBASIC14.25□□□□□ -0.13
NKX6-1P78426 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX6-1P78426 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-1P78426 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NKX6-1P78426 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NKX6-1P78426 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX6-1P78426 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
NKX6-1P78426 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
NKX6-1P78426 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
NKX6-1P78426 AL031731.1-201ENST00000642131 2094 ntBASIC14.24□□□□□ -0.13
NKX6-1P78426 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX6-1P78426 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX6-1P78426 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX6-1P78426 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NKX6-1P78426 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX6-1P78426 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX6-1P78426 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 MIR346-201ENST00000362234 95 ntBASIC14.24□□□□□ -0.13
NKX6-1P78426 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
NKX6-1P78426 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX6-1P78426 AC092580.3-201ENST00000430932 139 ntBASIC14.24□□□□□ -0.13
NKX6-1P78426 KRT17P7-201ENST00000451704 1104 ntBASIC14.24□□□□□ -0.13
NKX6-1P78426 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.24□□□□□ -0.13
NKX6-1P78426 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.24□□□□□ -0.13
NKX6-1P78426 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX6-1P78426 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.24□□□□□ -0.13
NKX6-1P78426 AC027369.6-201ENST00000525520 931 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms