Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AL136379.1-201ENST00000623471 2642 ntBASIC17.22■□□□□ 0.35
RAD23BP54727 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.22■□□□□ 0.35
RAD23BP54727 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
RAD23BP54727 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
RAD23BP54727 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.22■□□□□ 0.35
RAD23BP54727 METTL21AP1-201ENST00000438852 635 ntBASIC17.22■□□□□ 0.35
RAD23BP54727 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.22■□□□□ 0.35
RAD23BP54727 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.22■□□□□ 0.35
RAD23BP54727 AC092183.1-201ENST00000469884 875 ntBASIC17.22■□□□□ 0.35
RAD23BP54727 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.22■□□□□ 0.35
RAD23BP54727 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAD23BP54727 AC004449.1-201ENST00000564240 433 ntBASIC17.22■□□□□ 0.35
RAD23BP54727 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.22■□□□□ 0.35
RAD23BP54727 AC003101.2-201ENST00000612557 442 ntBASIC17.22■□□□□ 0.35
RAD23BP54727 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.22■□□□□ 0.35
RAD23BP54727 Z92544.3-201ENST00000624747 417 ntBASIC17.22■□□□□ 0.35
RAD23BP54727 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.22■□□□□ 0.35
RAD23BP54727 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.22■□□□□ 0.35
RAD23BP54727 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.22■□□□□ 0.35
RAD23BP54727 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.22■□□□□ 0.35
RAD23BP54727 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.22■□□□□ 0.35
RAD23BP54727 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAD23BP54727 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAD23BP54727 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.21■□□□□ 0.35
RAD23BP54727 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.21■□□□□ 0.35
RAD23BP54727 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.21■□□□□ 0.35
RAD23BP54727 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAD23BP54727 SPDYE7P-202ENST00000420373 878 ntBASIC17.21■□□□□ 0.35
RAD23BP54727 AL353705.2-201ENST00000428243 662 ntBASIC17.21■□□□□ 0.35
RAD23BP54727 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.21■□□□□ 0.35
RAD23BP54727 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.21■□□□□ 0.35
RAD23BP54727 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.21■□□□□ 0.35
RAD23BP54727 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.21■□□□□ 0.35
RAD23BP54727 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.21■□□□□ 0.35
RAD23BP54727 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.21■□□□□ 0.35
RAD23BP54727 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 AC007967.4-201ENST00000614700 386 ntBASIC17.21■□□□□ 0.35
RAD23BP54727 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAD23BP54727 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.21■□□□□ 0.35
RAD23BP54727 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.21■□□□□ 0.35
RAD23BP54727 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD23BP54727 AL136982.4-201ENST00000437689 1740 ntBASIC17.21■□□□□ 0.35
RAD23BP54727 AC069224.1-201ENST00000566372 1715 ntBASIC17.21■□□□□ 0.35
RAD23BP54727 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.21■□□□□ 0.34
RAD23BP54727 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.21■□□□□ 0.34
RAD23BP54727 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.21■□□□□ 0.34
RAD23BP54727 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
RAD23BP54727 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.2■□□□□ 0.34
RAD23BP54727 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD23BP54727 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.2■□□□□ 0.34
RAD23BP54727 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD23BP54727 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD23BP54727 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAD23BP54727 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAD23BP54727 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.2■□□□□ 0.34
RAD23BP54727 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RAD23BP54727 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD23BP54727 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
RAD23BP54727 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD23BP54727 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RAD23BP54727 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.2■□□□□ 0.34
RAD23BP54727 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.2■□□□□ 0.34
RAD23BP54727 AC025678.2-201ENST00000562061 970 ntBASIC17.2■□□□□ 0.34
RAD23BP54727 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.2■□□□□ 0.34
RAD23BP54727 AC105021.1-202ENST00000570572 669 ntBASIC17.2■□□□□ 0.34
RAD23BP54727 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.2■□□□□ 0.34
RAD23BP54727 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.2■□□□□ 0.34
RAD23BP54727 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD23BP54727 CDC14C-201ENST00000428251 1719 ntBASIC17.2■□□□□ 0.34
RAD23BP54727 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD23BP54727 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms