Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
ATXN3P54252 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.51■□□□□ 0.23
ATXN3P54252 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
ATXN3P54252 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.51■□□□□ 0.23
ATXN3P54252 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.51■□□□□ 0.23
ATXN3P54252 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.51■□□□□ 0.23
ATXN3P54252 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.51■□□□□ 0.23
ATXN3P54252 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.51■□□□□ 0.23
ATXN3P54252 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.51■□□□□ 0.23
ATXN3P54252 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
ATXN3P54252 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.51■□□□□ 0.23
ATXN3P54252 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.51■□□□□ 0.23
ATXN3P54252 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ATXN3P54252 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
ATXN3P54252 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.51■□□□□ 0.23
ATXN3P54252 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.51■□□□□ 0.23
ATXN3P54252 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
ATXN3P54252 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ATXN3P54252 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ATXN3P54252 AC022144.1-201ENST00000602255 1580 ntBASIC16.51■□□□□ 0.23
ATXN3P54252 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.51■□□□□ 0.23
ATXN3P54252 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATXN3P54252 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.5■□□□□ 0.23
ATXN3P54252 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ATXN3P54252 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ATXN3P54252 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ATXN3P54252 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.5■□□□□ 0.23
ATXN3P54252 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.5■□□□□ 0.23
ATXN3P54252 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.5■□□□□ 0.23
ATXN3P54252 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 MIR346-201ENST00000362234 95 ntBASIC16.5■□□□□ 0.23
ATXN3P54252 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.5■□□□□ 0.23
ATXN3P54252 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.5■□□□□ 0.23
ATXN3P54252 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 HLA-V-201ENST00000429037 534 ntBASIC16.5■□□□□ 0.23
ATXN3P54252 ATP5G2P4-201ENST00000442175 420 ntBASIC16.5■□□□□ 0.23
ATXN3P54252 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.5■□□□□ 0.23
ATXN3P54252 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.5■□□□□ 0.23
ATXN3P54252 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ATXN3P54252 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ATXN3P54252 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.5■□□□□ 0.23
ATXN3P54252 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.5■□□□□ 0.23
ATXN3P54252 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ATXN3P54252 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.5■□□□□ 0.23
ATXN3P54252 AL590560.3-201ENST00000623350 461 ntBASIC16.5■□□□□ 0.23
ATXN3P54252 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.5■□□□□ 0.23
ATXN3P54252 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.5■□□□□ 0.23
ATXN3P54252 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ATXN3P54252 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.5■□□□□ 0.23
ATXN3P54252 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATXN3P54252 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.49■□□□□ 0.23
ATXN3P54252 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
ATXN3P54252 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.49■□□□□ 0.23
ATXN3P54252 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ATXN3P54252 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATXN3P54252 RNU1-129P-201ENST00000384064 167 ntBASIC16.49■□□□□ 0.23
ATXN3P54252 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.49■□□□□ 0.23
ATXN3P54252 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.49■□□□□ 0.23
ATXN3P54252 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
ATXN3P54252 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
ATXN3P54252 COX5BP8-201ENST00000416911 349 ntBASIC16.49■□□□□ 0.23
ATXN3P54252 AL513523.2-202ENST00000427283 2040 ntBASIC16.49■□□□□ 0.23
ATXN3P54252 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.49■□□□□ 0.23
ATXN3P54252 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms