Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.02■□□□□ -0
RNF144AP50876 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.02■□□□□ -0
RNF144AP50876 MCCD1P2-201ENST00000423228 335 ntBASIC15.02■□□□□ -0
RNF144AP50876 HTR5BP-201ENST00000430851 1154 ntBASIC15.02■□□□□ -0
RNF144AP50876 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.02■□□□□ -0
RNF144AP50876 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.02■□□□□ -0
RNF144AP50876 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.02■□□□□ -0
RNF144AP50876 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.02■□□□□ -0
RNF144AP50876 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.02■□□□□ -0
RNF144AP50876 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.02■□□□□ -0
RNF144AP50876 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RNF144AP50876 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RNF144AP50876 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.02□□□□□ -0.01
RNF144AP50876 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RNF144AP50876 AC104640.1-201ENST00000562617 2109 ntBASIC15.02□□□□□ -0.01
RNF144AP50876 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RNF144AP50876 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF144AP50876 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF144AP50876 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.02□□□□□ -0.01
RNF144AP50876 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.02□□□□□ -0.01
RNF144AP50876 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF144AP50876 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RNF144AP50876 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF144AP50876 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.02□□□□□ -0.01
RNF144AP50876 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF144AP50876 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.01□□□□□ -0.01
RNF144AP50876 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF144AP50876 U82695.1-201ENST00000635752 1889 ntBASIC15.01□□□□□ -0.01
RNF144AP50876 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF144AP50876 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RNF144AP50876 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RNF144AP50876 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 LINC02447-202ENST00000501888 2146 ntBASIC15.01□□□□□ -0.01
RNF144AP50876 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF144AP50876 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF144AP50876 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF144AP50876 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RNF144AP50876 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.01□□□□□ -0.01
RNF144AP50876 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 AC004832.2-201ENST00000426397 482 ntBASIC15.01□□□□□ -0.01
RNF144AP50876 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.01□□□□□ -0.01
RNF144AP50876 CEND1P1-201ENST00000451006 455 ntBASIC15.01□□□□□ -0.01
RNF144AP50876 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.01□□□□□ -0.01
RNF144AP50876 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.01□□□□□ -0.01
RNF144AP50876 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.01□□□□□ -0.01
RNF144AP50876 AC092865.5-201ENST00000545435 363 ntBASIC15.01□□□□□ -0.01
RNF144AP50876 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
RNF144AP50876 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RNF144AP50876 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF144AP50876 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RNF144AP50876 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF144AP50876 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.01□□□□□ -0.01
RNF144AP50876 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF144AP50876 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF144AP50876 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF144AP50876 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF144AP50876 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 AC126755.1-201ENST00000525846 6405 ntBASIC15.01□□□□□ -0.01
RNF144AP50876 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF144AP50876 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RNF144AP50876 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 CDC14C-201ENST00000428251 1719 ntBASIC15□□□□□ -0.01
RNF144AP50876 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
RNF144AP50876 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15□□□□□ -0.01
RNF144AP50876 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15□□□□□ -0.01
RNF144AP50876 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15□□□□□ -0.01
RNF144AP50876 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 ADH5P3-201ENST00000433842 1137 ntBASIC15□□□□□ -0.01
RNF144AP50876 SPDYE11-202ENST00000450699 704 ntBASIC15□□□□□ -0.01
RNF144AP50876 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15□□□□□ -0.01
RNF144AP50876 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15□□□□□ -0.01
RNF144AP50876 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15□□□□□ -0.01
RNF144AP50876 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15□□□□□ -0.01
RNF144AP50876 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF144AP50876 SPDYE9P-201ENST00000570642 692 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms