Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTNNA1P35221 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNNA1P35221 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNNA1P35221 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNNA1P35221 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNNA1P35221 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNNA1P35221 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNNA1P35221 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNNA1P35221 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNNA1P35221 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNNA1P35221 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CTNNA1P35221 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.05■□□□□ 0.32
CTNNA1P35221 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.05■□□□□ 0.32
CTNNA1P35221 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.05■□□□□ 0.32
CTNNA1P35221 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNNA1P35221 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.04■□□□□ 0.32
CTNNA1P35221 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CTNNA1P35221 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CTNNA1P35221 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.04■□□□□ 0.32
CTNNA1P35221 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CTNNA1P35221 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.04■□□□□ 0.32
CTNNA1P35221 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
CTNNA1P35221 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.04■□□□□ 0.32
CTNNA1P35221 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 KRT18P34-201ENST00000488218 1270 ntBASIC17.04■□□□□ 0.32
CTNNA1P35221 RNA5SP415-201ENST00000517246 115 ntBASIC17.04■□□□□ 0.32
CTNNA1P35221 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.04■□□□□ 0.32
CTNNA1P35221 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.04■□□□□ 0.32
CTNNA1P35221 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.04■□□□□ 0.32
CTNNA1P35221 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.04■□□□□ 0.32
CTNNA1P35221 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CTNNA1P35221 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.04■□□□□ 0.32
CTNNA1P35221 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CTNNA1P35221 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 AC023157.3-201ENST00000619086 2088 ntBASIC17.04■□□□□ 0.32
CTNNA1P35221 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.04■□□□□ 0.32
CTNNA1P35221 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTNNA1P35221 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CTNNA1P35221 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CTNNA1P35221 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CTNNA1P35221 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.03■□□□□ 0.32
CTNNA1P35221 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
CTNNA1P35221 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CTNNA1P35221 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.03■□□□□ 0.32
CTNNA1P35221 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.03■□□□□ 0.32
CTNNA1P35221 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.03■□□□□ 0.32
CTNNA1P35221 AL365330.1-201ENST00000607459 531 ntBASIC17.03■□□□□ 0.32
CTNNA1P35221 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.03■□□□□ 0.32
CTNNA1P35221 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.03■□□□□ 0.32
CTNNA1P35221 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CTNNA1P35221 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNNA1P35221 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.03■□□□□ 0.32
CTNNA1P35221 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.02■□□□□ 0.32
CTNNA1P35221 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNNA1P35221 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.02■□□□□ 0.32
CTNNA1P35221 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNNA1P35221 AC073439.1-201ENST00000624121 1774 ntBASIC17.02■□□□□ 0.32
CTNNA1P35221 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CTNNA1P35221 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.02■□□□□ 0.32
CTNNA1P35221 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNNA1P35221 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.02■□□□□ 0.32
CTNNA1P35221 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.02■□□□□ 0.32
CTNNA1P35221 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.02■□□□□ 0.32
CTNNA1P35221 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.02■□□□□ 0.32
CTNNA1P35221 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CTNNA1P35221 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNNA1P35221 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNNA1P35221 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms