Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TNFSF4P23510 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.81□□□□□ -0.2
TNFSF4P23510 FOXO1B-201ENST00000504678 1527 ntBASIC13.81□□□□□ -0.2
TNFSF4P23510 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.81□□□□□ -0.2
TNFSF4P23510 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TNFSF4P23510 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 GPS2P2-201ENST00000430745 888 ntBASIC13.81□□□□□ -0.2
TNFSF4P23510 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.81□□□□□ -0.2
TNFSF4P23510 AC109322.1-201ENST00000524499 1264 ntBASIC13.81□□□□□ -0.2
TNFSF4P23510 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.81□□□□□ -0.2
TNFSF4P23510 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.81□□□□□ -0.2
TNFSF4P23510 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.81□□□□□ -0.2
TNFSF4P23510 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.81□□□□□ -0.2
TNFSF4P23510 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.81□□□□□ -0.2
TNFSF4P23510 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
TNFSF4P23510 AC093028.1-201ENST00000622998 982 ntBASIC13.81□□□□□ -0.2
TNFSF4P23510 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.81□□□□□ -0.2
TNFSF4P23510 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TNFSF4P23510 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TNFSF4P23510 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TNFSF4P23510 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TNFSF4P23510 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TNFSF4P23510 AL118508.1-201ENST00000613502 2345 ntBASIC13.81□□□□□ -0.2
TNFSF4P23510 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.81□□□□□ -0.2
TNFSF4P23510 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TNFSF4P23510 AC079328.2-201ENST00000561241 3354 ntBASIC13.81□□□□□ -0.2
TNFSF4P23510 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.81□□□□□ -0.2
TNFSF4P23510 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TNFSF4P23510 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.81□□□□□ -0.2
TNFSF4P23510 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.81□□□□□ -0.2
TNFSF4P23510 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TNFSF4P23510 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
TNFSF4P23510 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 AC006449.6-201ENST00000612330 2296 ntBASIC13.8□□□□□ -0.2
TNFSF4P23510 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TNFSF4P23510 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.8□□□□□ -0.2
TNFSF4P23510 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TNFSF4P23510 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TNFSF4P23510 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TNFSF4P23510 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.8□□□□□ -0.2
TNFSF4P23510 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.8□□□□□ -0.2
TNFSF4P23510 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.8□□□□□ -0.2
TNFSF4P23510 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TNFSF4P23510 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 AL139400.1-201ENST00000366220 510 ntBASIC13.8□□□□□ -0.2
TNFSF4P23510 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.8□□□□□ -0.2
TNFSF4P23510 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.8□□□□□ -0.2
TNFSF4P23510 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.8□□□□□ -0.2
TNFSF4P23510 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.8□□□□□ -0.2
TNFSF4P23510 AC125807.1-201ENST00000483097 614 ntBASIC13.8□□□□□ -0.2
TNFSF4P23510 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.8□□□□□ -0.2
TNFSF4P23510 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.8□□□□□ -0.2
TNFSF4P23510 Z92544.3-201ENST00000624747 417 ntBASIC13.8□□□□□ -0.2
TNFSF4P23510 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.8□□□□□ -0.2
TNFSF4P23510 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TNFSF4P23510 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.8□□□□□ -0.2
TNFSF4P23510 TUBB3P1-201ENST00000405796 1332 ntBASIC13.8□□□□□ -0.2
TNFSF4P23510 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TNFSF4P23510 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TNFSF4P23510 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TNFSF4P23510 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.8□□□□□ -0.2
TNFSF4P23510 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.8□□□□□ -0.2
TNFSF4P23510 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.8□□□□□ -0.2
TNFSF4P23510 AC005052.1-201ENST00000625181 2492 ntBASIC13.8□□□□□ -0.2
TNFSF4P23510 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TNFSF4P23510 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms