Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
KCNA3P22001 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KCNA3P22001 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
KCNA3P22001 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.41■□□□□ 0.7
KCNA3P22001 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.41■□□□□ 0.7
KCNA3P22001 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.41■□□□□ 0.7
KCNA3P22001 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC19.41■□□□□ 0.7
KCNA3P22001 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.41■□□□□ 0.7
KCNA3P22001 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KCNA3P22001 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.41■□□□□ 0.7
KCNA3P22001 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.41■□□□□ 0.7
KCNA3P22001 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCNA3P22001 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.41■□□□□ 0.7
KCNA3P22001 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
KCNA3P22001 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KCNA3P22001 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.4■□□□□ 0.7
KCNA3P22001 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.4■□□□□ 0.7
KCNA3P22001 CNN2P10-201ENST00000443067 918 ntBASIC19.4■□□□□ 0.7
KCNA3P22001 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.4■□□□□ 0.7
KCNA3P22001 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.4■□□□□ 0.7
KCNA3P22001 SPTLC1P5-201ENST00000450718 252 ntBASIC19.4■□□□□ 0.7
KCNA3P22001 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.4■□□□□ 0.7
KCNA3P22001 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
KCNA3P22001 AC245884.6-201ENST00000515672 1067 ntBASIC19.4■□□□□ 0.7
KCNA3P22001 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.4■□□□□ 0.7
KCNA3P22001 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.4■□□□□ 0.7
KCNA3P22001 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.4■□□□□ 0.7
KCNA3P22001 AC018635.2-201ENST00000608625 364 ntBASIC19.4■□□□□ 0.7
KCNA3P22001 AP001505.2-201ENST00000616815 443 ntBASIC19.4■□□□□ 0.7
KCNA3P22001 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KCNA3P22001 AC060834.1-201ENST00000443027 2032 ntBASIC19.4■□□□□ 0.7
KCNA3P22001 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.4■□□□□ 0.7
KCNA3P22001 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.4■□□□□ 0.7
KCNA3P22001 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
KCNA3P22001 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNA3P22001 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KCNA3P22001 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.39■□□□□ 0.7
KCNA3P22001 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KCNA3P22001 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.39■□□□□ 0.7
KCNA3P22001 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
KCNA3P22001 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.39■□□□□ 0.7
KCNA3P22001 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.39■□□□□ 0.69
KCNA3P22001 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.39■□□□□ 0.69
KCNA3P22001 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KCNA3P22001 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.39■□□□□ 0.69
KCNA3P22001 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.39■□□□□ 0.69
KCNA3P22001 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.39■□□□□ 0.69
KCNA3P22001 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.39■□□□□ 0.69
KCNA3P22001 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
KCNA3P22001 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNA3P22001 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNA3P22001 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNA3P22001 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNA3P22001 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNA3P22001 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNA3P22001 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNA3P22001 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.38■□□□□ 0.69
KCNA3P22001 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms