Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
KRT3P12035 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.97■□□□□ 0.31
KRT3P12035 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.97■□□□□ 0.31
KRT3P12035 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
KRT3P12035 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT3P12035 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
KRT3P12035 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.97■□□□□ 0.31
KRT3P12035 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.97■□□□□ 0.31
KRT3P12035 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.97■□□□□ 0.31
KRT3P12035 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
KRT3P12035 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.97■□□□□ 0.31
KRT3P12035 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.97■□□□□ 0.31
KRT3P12035 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.97■□□□□ 0.31
KRT3P12035 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT3P12035 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 AC055717.3-201ENST00000622967 595 ntBASIC16.97■□□□□ 0.31
KRT3P12035 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
KRT3P12035 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.97■□□□□ 0.31
KRT3P12035 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT3P12035 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.97■□□□□ 0.31
KRT3P12035 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.97■□□□□ 0.31
KRT3P12035 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT3P12035 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KRT3P12035 AC134407.2-201ENST00000625089 1978 ntBASIC16.97■□□□□ 0.31
KRT3P12035 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.97■□□□□ 0.31
KRT3P12035 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.97■□□□□ 0.31
KRT3P12035 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT3P12035 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KRT3P12035 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT3P12035 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT3P12035 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT3P12035 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT3P12035 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT3P12035 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
KRT3P12035 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT3P12035 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
KRT3P12035 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
KRT3P12035 AC011477.6-201ENST00000604980 1927 ntBASIC16.96■□□□□ 0.31
KRT3P12035 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT3P12035 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT3P12035 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
KRT3P12035 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.96■□□□□ 0.31
KRT3P12035 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT3P12035 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT3P12035 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT3P12035 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT3P12035 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT3P12035 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.96■□□□□ 0.31
KRT3P12035 AP000344.2-201ENST00000512987 629 ntBASIC16.96■□□□□ 0.31
KRT3P12035 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.96■□□□□ 0.31
KRT3P12035 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.96■□□□□ 0.31
KRT3P12035 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.96■□□□□ 0.31
KRT3P12035 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.96■□□□□ 0.31
KRT3P12035 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.96■□□□□ 0.31
KRT3P12035 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
KRT3P12035 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT3P12035 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT3P12035 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
KRT3P12035 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
KRT3P12035 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KRT3P12035 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
KRT3P12035 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.95■□□□□ 0.3
KRT3P12035 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.95■□□□□ 0.3
KRT3P12035 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KRT3P12035 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.95■□□□□ 0.3
KRT3P12035 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 AC211486.1-202ENST00000416371 468 ntBASIC16.95■□□□□ 0.3
KRT3P12035 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.95■□□□□ 0.3
KRT3P12035 AC211476.1-201ENST00000503899 468 ntBASIC16.95■□□□□ 0.3
KRT3P12035 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
KRT3P12035 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
KRT3P12035 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.95■□□□□ 0.3
KRT3P12035 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms