Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.21■□□□□ 0.18
RETP07949 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.21■□□□□ 0.18
RETP07949 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RETP07949 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 TUBB1P2-201ENST00000422712 1306 ntBASIC16.2■□□□□ 0.18
RETP07949 TUBB1P1-201ENST00000503144 1300 ntBASIC16.2■□□□□ 0.18
RETP07949 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RETP07949 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RETP07949 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RETP07949 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.2■□□□□ 0.18
RETP07949 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RETP07949 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RETP07949 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.2■□□□□ 0.18
RETP07949 AC092506.1-202ENST00000401022 528 ntBASIC16.2■□□□□ 0.18
RETP07949 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.2■□□□□ 0.18
RETP07949 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
RETP07949 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.2■□□□□ 0.18
RETP07949 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RETP07949 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.2■□□□□ 0.18
RETP07949 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.2■□□□□ 0.18
RETP07949 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.2■□□□□ 0.18
RETP07949 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.2■□□□□ 0.18
RETP07949 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.2■□□□□ 0.18
RETP07949 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.2■□□□□ 0.18
RETP07949 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.2■□□□□ 0.18
RETP07949 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.2■□□□□ 0.18
RETP07949 MIR8072-201ENST00000614241 80 ntBASIC16.2■□□□□ 0.18
RETP07949 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.2■□□□□ 0.18
RETP07949 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 KRT8P12-202ENST00000472924 1397 ntBASIC16.2■□□□□ 0.18
RETP07949 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 AL513477.1-201ENST00000602865 2407 ntBASIC16.2■□□□□ 0.18
RETP07949 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.2■□□□□ 0.18
RETP07949 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.2■□□□□ 0.18
RETP07949 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RETP07949 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RETP07949 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RETP07949 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.19■□□□□ 0.18
RETP07949 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
RETP07949 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.19■□□□□ 0.18
RETP07949 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RETP07949 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RETP07949 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.19■□□□□ 0.18
RETP07949 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.19■□□□□ 0.18
RETP07949 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.19■□□□□ 0.18
RETP07949 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.19■□□□□ 0.18
RETP07949 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RETP07949 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.19■□□□□ 0.18
RETP07949 AL355994.2-201ENST00000447882 704 ntBASIC16.19■□□□□ 0.18
RETP07949 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.19■□□□□ 0.18
RETP07949 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.19■□□□□ 0.18
RETP07949 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RETP07949 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.19■□□□□ 0.18
RETP07949 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.19■□□□□ 0.18
RETP07949 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.19■□□□□ 0.18
RETP07949 CICP6-201ENST00000457191 2729 ntBASIC16.19■□□□□ 0.18
RETP07949 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.19■□□□□ 0.18
RETP07949 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.19■□□□□ 0.18
RETP07949 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RETP07949 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.19■□□□□ 0.18
RETP07949 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
RETP07949 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.19■□□□□ 0.18
RETP07949 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms