Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TCRAP04437 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.3□□□□□ -0.44
TCRAP04437 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.3□□□□□ -0.44
TCRAP04437 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.3□□□□□ -0.44
TCRAP04437 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 AC006557.2-201ENST00000592985 1240 ntBASIC12.3□□□□□ -0.44
TCRAP04437 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 AC090616.6-203ENST00000579186 1945 ntBASIC12.3□□□□□ -0.44
TCRAP04437 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
TCRAP04437 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.3□□□□□ -0.44
TCRAP04437 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
TCRAP04437 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TCRAP04437 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.3□□□□□ -0.44
TCRAP04437 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TCRAP04437 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TCRAP04437 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.3□□□□□ -0.44
TCRAP04437 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
TCRAP04437 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.3□□□□□ -0.44
TCRAP04437 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.3□□□□□ -0.44
TCRAP04437 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.3□□□□□ -0.44
TCRAP04437 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TCRAP04437 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.29□□□□□ -0.44
TCRAP04437 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TCRAP04437 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.29□□□□□ -0.44
TCRAP04437 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.29□□□□□ -0.44
TCRAP04437 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.29□□□□□ -0.44
TCRAP04437 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.29□□□□□ -0.44
TCRAP04437 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.29□□□□□ -0.44
TCRAP04437 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
TCRAP04437 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 RPS15P9-201ENST00000494093 319 ntBASIC12.29□□□□□ -0.44
TCRAP04437 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.29□□□□□ -0.44
TCRAP04437 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.29□□□□□ -0.44
TCRAP04437 SART3-203ENST00000546611 1184 ntBASIC12.29□□□□□ -0.44
TCRAP04437 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TCRAP04437 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.29□□□□□ -0.44
TCRAP04437 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
TCRAP04437 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
TCRAP04437 AL355877.3-201ENST00000622820 899 ntBASIC12.29□□□□□ -0.44
TCRAP04437 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.29□□□□□ -0.44
TCRAP04437 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.29□□□□□ -0.44
TCRAP04437 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.29□□□□□ -0.44
TCRAP04437 LINC01101-201ENST00000622953 1884 ntBASIC12.29□□□□□ -0.44
TCRAP04437 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TCRAP04437 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.29□□□□□ -0.44
TCRAP04437 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TCRAP04437 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.29□□□□□ -0.44
TCRAP04437 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
TCRAP04437 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
TCRAP04437 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRAP04437 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.28□□□□□ -0.44
TCRAP04437 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.28□□□□□ -0.44
TCRAP04437 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRAP04437 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms