Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.22
CD3DP04234 AC104581.4-201ENST00000623126 3052 ntBASIC13.71□□□□□ -0.22
CD3DP04234 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD3DP04234 AP005117.1-201ENST00000584346 1413 ntBASIC13.71□□□□□ -0.22
CD3DP04234 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.71□□□□□ -0.22
CD3DP04234 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.71□□□□□ -0.22
CD3DP04234 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.71□□□□□ -0.22
CD3DP04234 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CD3DP04234 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD3DP04234 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.71□□□□□ -0.22
CD3DP04234 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD3DP04234 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CD3DP04234 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD3DP04234 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.22
CD3DP04234 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
CD3DP04234 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.71□□□□□ -0.22
CD3DP04234 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CD3DP04234 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.7□□□□□ -0.22
CD3DP04234 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CD3DP04234 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.7□□□□□ -0.22
CD3DP04234 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.7□□□□□ -0.22
CD3DP04234 AGAP7P-201ENST00000582299 2062 ntBASIC13.7□□□□□ -0.22
CD3DP04234 AGAP14-201ENST00000624701 2060 ntBASIC13.7□□□□□ -0.22
CD3DP04234 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.7□□□□□ -0.22
CD3DP04234 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CD3DP04234 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CD3DP04234 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.7□□□□□ -0.22
CD3DP04234 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.7□□□□□ -0.22
CD3DP04234 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.7□□□□□ -0.22
CD3DP04234 PTCHD3P3-201ENST00000403073 906 ntBASIC13.7□□□□□ -0.22
CD3DP04234 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.7□□□□□ -0.22
CD3DP04234 AC074051.2-201ENST00000565115 352 ntBASIC13.7□□□□□ -0.22
CD3DP04234 MIR5100-201ENST00000579544 119 ntBASIC13.7□□□□□ -0.22
CD3DP04234 AC005412.3-201ENST00000580309 715 ntBASIC13.7□□□□□ -0.22
CD3DP04234 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CD3DP04234 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
CD3DP04234 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 OR2I1P-209ENST00000641730 5365 ntBASIC13.7□□□□□ -0.22
CD3DP04234 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.7□□□□□ -0.22
CD3DP04234 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CD3DP04234 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD3DP04234 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CD3DP04234 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.69□□□□□ -0.22
CD3DP04234 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CD3DP04234 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.69□□□□□ -0.22
CD3DP04234 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
CD3DP04234 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.69□□□□□ -0.22
CD3DP04234 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.69□□□□□ -0.22
CD3DP04234 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.69□□□□□ -0.22
CD3DP04234 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.69□□□□□ -0.22
CD3DP04234 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.69□□□□□ -0.22
CD3DP04234 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
CD3DP04234 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.69□□□□□ -0.22
CD3DP04234 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 LINC00265-3P-201ENST00000447588 903 ntBASIC13.69□□□□□ -0.22
CD3DP04234 TSSC2-201ENST00000450217 709 ntBASIC13.69□□□□□ -0.22
CD3DP04234 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.69□□□□□ -0.22
CD3DP04234 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.69□□□□□ -0.22
CD3DP04234 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.69□□□□□ -0.22
CD3DP04234 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.69□□□□□ -0.22
CD3DP04234 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.69□□□□□ -0.22
CD3DP04234 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.69□□□□□ -0.22
CD3DP04234 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.69□□□□□ -0.22
CD3DP04234 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD3DP04234 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms